Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1789601 - 1789625 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank ▲ Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Carbohydrate-Binding Modules (CBMs) CBM48 VTP32596.1 rhz:RHPLAN_20040 Rhodoplanes sp. 77.3469 90.57 834.328
Glycoside Hydrolases (GHs) GH13_11 VTP32596.1 rpb:RPB_RS11320 Rhodopseudomonas palustris HaA2 79.065 90.94 834.328
Glycoside Hydrolases (GHs) GH13_11 VTP32596.1 rhz:RHPLAN_20040 Rhodoplanes sp. 77.3469 90.57 834.328
Glycoside Hydrolases (GHs) GH2 VTP32612.1 ara:ARAD_RS18190 Rhizobium rhizogenes K84 47.8426 97.76 733.406
GlycosylTransferases (GTs) GT2 VTP32628.1 abq:ABAZ39_RS01050 Azospirillum brasilense 49.3188 98.65 303.908
GlycosylTransferases (GTs) GT2 VTP32731.1 msl:MSIL_RS13840 Methylocella silvestris BL2 40.0974 100.0 392.504
Glycoside Hydrolases (GHs) GH25 VTP32742.1 bid:ST2099 Beijerinckia indica 70.3057 93.46 355.525
GlycosylTransferases (GTs) GT4 VTP32760.1 mrd:MRAD2831_RS53540 Methylobacterium radiotolerans JCM 2831 53.7736 98.6 442.965
Glycoside Hydrolases (GHs) GH23 VTP32945.1 msl:MSIL_RS04375 Methylocella silvestris BL2 58.2114 80.07 704.516
Glycoside Hydrolases (GHs) GH25 VTP32973.1 msl:MSIL_RS03530 Methylocella silvestris BL2 54.4554 70.13 244.202
GlycosylTransferases (GTs) GT2 VTP33051.1 mxa:MXAN_RS05585 Myxococcus xanthus DK 1622 33.871 73.8 32.7278
GlycosylTransferases (GTs) GT1 VTP33227.1 mrd:MRAD2831_RS51210 Methylobacterium radiotolerans JCM 2831 54.4218 100.0 452.21
GlycosylTransferases (GTs) GT4 VTP33420.1 bid:BIND_RS00580 Beijerinckia indica 61.4035 64.58 279.641
GlycosylTransferases (GTs) GT4 VTP33421.1 msl:MSIL_RS04920 Methylocella silvestris BL2 60.4651 79.62 107.842
Glycoside Hydrolases (GHs) GH16 VTP33441.1 rlb:RLEG3_RS16910 Rhizobium leguminosarum bv. trifolii WSM1689 49.4024 88.69 249.595
GlycosylTransferases (GTs) GT4 VTP33442.1 syf:SYNPCC7942_RS10275 Synechococcus elongatus PCC 7942 = FACHB-805 62.0 92.34 454.907
GlycosylTransferases (GTs) GT4 VTP33442.1 syc:SYC_RS10985 Synechococcus elongatus 62.0 92.34 454.907
GlycosylTransferases (GTs) GT4 VTP33444.1 mpo:MPOP_RS17580 Methylorubrum populi BJ001 55.0459 31.32 130.183
Glycoside Hydrolases (GHs) GH23 VTP33487.1 met:M446_RS21650 Methylobacterium sp. 4-46 43.0657 93.19 201.445
Carbohydrate-Binding Modules (CBMs) CBM48 VTP33522.1 mrd:MRAD2831_RS39890 Methylobacterium radiotolerans JCM 2831 65.8602 99.86 1036.17
Glycoside Hydrolases (GHs) GH13_9 VTP33522.1 mrd:MRAD2831_RS39890 Methylobacterium radiotolerans JCM 2831 65.8602 99.86 1036.17
Glycoside Hydrolases (GHs) GH13_16 VTP33523.1 bid:BIND_RS15260 Beijerinckia indica 63.653 100.0 1392.1
Glycoside Hydrolases (GHs) GH13 VTP33524.1 mex:MEXT_RS13675 Methylorubrum extorquens PA1 63.354 92.79 850.121
Glycoside Hydrolases (GHs) GH13 VTP33524.1 mno:MNOD_RS35710 Methylobacterium nodulans ORS 2060 63.9876 93.22 850.121
Glycoside Hydrolases (GHs) GH13 VTP33524.1 mea:MEXAM1_RS13685 Methylorubrum extorquens AM1 63.354 92.79 850.121
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024