Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1789701 - 1789725 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL7_1 SOS36422.1 Alginate lyase gm05172:IYO_RS25665 Pseudomonas syringae pv. actinidiae ICMP 18884 100.0 100.0 461.07
Polysaccharide Lyases (PLs) PL7_1 VEF13373.1 Lyase gm05153:PMO01_RS24835 Pseudomonas moraviensis R28-S 96.3964 100.0 444.121
Polysaccharide Lyases (PLs) PL7_1 AAY35578.1 Lyase, putative psb:PSYR_0508 Pseudomonas syringae 100.0 100.0 460.685
Polysaccharide Lyases (PLs) PL7_1 SDS47060.1 Alginate lyase gm05153:PMO01_RS24835 Pseudomonas moraviensis R28-S 85.9729 99.54 411.764
Polysaccharide Lyases (PLs) PL7_1 SDV16437.1 Alginate lyase pfs:PFLU_RS28060 Pseudomonas fluorescens 95.4751 100.0 434.876
Polysaccharide Lyases (PLs) PL7_1 SDU51327.1 pbc:CD58_RS10870 Pseudomonas brassicacearum 93.0876 99.54 420.239
Polysaccharide Lyases (PLs) PL7_1 SDU89410.1 pbc:CD58_RS10870 Pseudomonas brassicacearum 91.2844 100.0 416.387
Polysaccharide Lyases (PLs) PL7_1 SDU23192.1 pbc:CD58_RS26595 Pseudomonas brassicacearum 93.6937 100.0 434.106
Polysaccharide Lyases (PLs) PL7_1 SDP65797.1 pba:PSEBR_RS18770 Pseudomonas brassicacearum 100.0 100.0 448.358
Polysaccharide Lyases (PLs) PL7_1 SDU23213.1 pbc:CD58_RS26590 Pseudomonas brassicacearum 90.0 98.65 414.461
Polysaccharide Lyases (PLs) PL7_1 SDP93464.1 gm05617:AK973_RS28975 Pseudomonas brassicacearum 100.0 100.0 453.751
Polysaccharide Lyases (PLs) PL7_1 SDP93464.1 pba:PSEBR_RS28180 Pseudomonas brassicacearum 100.0 100.0 453.751
Polysaccharide Lyases (PLs) PL7_1 SOS27910.1 gm05172:IYO_RS12595 Pseudomonas syringae pv. actinidiae ICMP 18884 100.0 97.36 452.981
Polysaccharide Lyases (PLs) PL7_1 SDV10638.1 pfe:PSF113_RS58220 Pseudomonas ogarae 92.3423 100.0 426.402
Polysaccharide Lyases (PLs) PL7_1 SCM63876.1 gm05826:HW04_RS09910 Pseudomonas aeruginosa 97.3094 100.0 440.269
Polysaccharide Lyases (PLs) PL7_1 SCM63876.1 gm05827:HW03_RS26635 Pseudomonas aeruginosa 97.3094 100.0 440.269
Polysaccharide Lyases (PLs) PL7_1 SIS23859.1 gm05482:AO356_RS22330 Pseudomonas fluorescens 87.156 100.0 398.667
Polysaccharide Lyases (PLs) PL7_1 SDD59740.1 pfo:PFL01_RS26470 Pseudomonas fluorescens 94.5946 100.0 440.269
Polysaccharide Lyases (PLs) PL7_1 SDV07019.1 pfn:HZ99_RS15225 Pseudomonas fluorescens 95.0226 100.0 437.573
Polysaccharide Lyases (PLs) PL7_1 SIS11730.1 gm06195:TK06_RS23330 Pseudomonas fluorescens 90.991 100.0 420.239
Polysaccharide Lyases (PLs) PL7_1 SDT63307.1 gm06195:TK06_RS23330 Pseudomonas fluorescens 82.8829 98.23 382.104
Polysaccharide Lyases (PLs) PL7_1 SDG13107.1 pfs:PFLU_RS28060 Pseudomonas fluorescens 93.2127 100.0 430.639
Polysaccharide Lyases (PLs) PL7_1 SQH36974.1 pfn:HZ99_RS15225 Pseudomonas fluorescens 90.4977 100.0 419.853
Polysaccharide Lyases (PLs) PL7_1 SIS11719.1 gm06195:TK06_RS23325 Pseudomonas fluorescens 90.0901 100.0 424.861
Polysaccharide Lyases (PLs) PL7_1 SPD80156.1 psp:PSPPH_RS02530 Pseudomonas syringae 99.5516 100.0 457.218
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024