Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1789701 - 1789725 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank Protein Name Gene ID MBGD ▲ Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
GlycosylTransferases (GTs) GT9 AAM87308.1 Lipopolysaccharide biosynthesis protein ypz:YPZ3_RS02415 Yersinia pestis Z176003 100.0 96.99 787.334
GlycosylTransferases (GTs) GT9 AAS63913.2 Lipopolysaccharide core biosynthesis protein ypz:YPZ3_RS02415 Yersinia pestis Z176003 100.0 97.48 787.334
GlycosylTransferases (GTs) GT9 ABG16620.1 Lipopolysaccharide core biosynthesis protein ypz:YPZ3_RS02415 Yersinia pestis Z176003 100.0 97.48 787.334
GlycosylTransferases (GTs) GT9 ABX86467.1 ypz:YPZ3_RS02415 Yersinia pestis Z176003 100.0 100.0 787.334
GlycosylTransferases (GTs) GT9 AKB90436.1 ypz:YPZ3_RS02415 Yersinia pestis Z176003 100.0 100.0 787.334
GlycosylTransferases (GTs) GT9 CAC89274.1 ypz:YPZ3_RS02415 Yersinia pestis Z176003 99.711 100.0 707.983
Carbohydrate Esterases (CEs) CE8 ADE63322.1 ypz:YPZ3_RS02460 Yersinia pestis Z176003 100.0 100.0 728.013
Carbohydrate Esterases (CEs) CE8 AKT01892.1 ypz:YPZ3_RS02460 Yersinia pestis Z176003 100.0 100.0 728.013
Glycoside Hydrolases (GHs) GH23 AAM87275.1 peptidoglycan lytic exotransglycosylase ypz:YPZ3_RS02600 Yersinia pestis Z176003 100.0 98.45 1284.24
Glycoside Hydrolases (GHs) GH23 AJK24909.1 ypz:YPZ3_RS02600 Yersinia pestis Z176003 100.0 100.0 1284.24
Glycoside Hydrolases (GHs) GH23 AKS98631.1 ypz:YPZ3_RS02600 Yersinia pestis Z176003 100.0 100.0 1284.24
GlycosylTransferases (GTs) GT28 AJJ14258.1 ypz:YPZ3_RS03130 Yersinia pestis Z176003 100.0 95.5 676.011
GlycosylTransferases (GTs) GT28 AKB88518.1 ypz:YPZ3_RS03130 Yersinia pestis Z176003 100.0 95.5 676.011
Carbohydrate Esterases (CEs) CE11 AAS63771.1 UDP-3-O-acyl-N-acetylglucosamine deacetylase 66842885 ypz:YPZ3_RS03160 Yersinia pestis Z176003 100.0 100.0 625.55
Carbohydrate Esterases (CEs) CE11 ACA69779.1 UDP-3-O-acyl-N-acetylglucosamine deacetylase ypz:YPZ3_RS03160 Yersinia pestis Z176003 100.0 100.0 617.461
Carbohydrate Esterases (CEs) CE11 AJJ78419.1 ypz:YPZ3_RS03160 Yersinia pestis Z176003 100.0 100.0 615.535
Carbohydrate Esterases (CEs) CE11 AKS99758.1 ypz:YPZ3_RS03160 Yersinia pestis Z176003 100.0 100.0 615.535
Glycoside Hydrolases (GHs) GH94 ADE63491.1 ypz:YPZ3_RS03415 Yersinia pestis Z176003 99.5434 100.0 2191.77
Glycoside Hydrolases (GHs) GH94 ACY61224.1 ypz:YPZ3_RS03415 Yersinia pestis Z176003 99.5375 100.0 2164.42
Glycoside Hydrolases (GHs) GH3 AJJ85291.1 ypz:YPZ3_RS03445 Yersinia pestis Z176003 100.0 100.0 978.778
Glycoside Hydrolases (GHs) GH3 AJK25356.1 ypz:YPZ3_RS03445 Yersinia pestis Z176003 100.0 100.0 1469.14
Glycoside Hydrolases (GHs) GH3 AKS75882.1 ypz:YPZ3_RS03445 Yersinia pestis Z176003 100.0 100.0 1469.14
Glycoside Hydrolases (GHs) GH34 AAA16907.1 Neuraminidase (Fragment) ypz:YPZ3_RS03805 Yersinia pestis Z176003 31.0345 56.31 30.4166
Glycoside Hydrolases (GHs) GH34 AAL60442.1 Truncated neuraminidase ypz:YPZ3_RS03805 Yersinia pestis Z176003 33.9286 75.67 29.6462
Glycoside Hydrolases (GHs) GH34 AIE50786.1 Neuraminidase ypz:YPZ3_RS03805 Yersinia pestis Z176003 31.746 13.43 33.113
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024