Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1791451 - 1791475 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank Protein Name Gene ID ▲ MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Glycoside Hydrolases (GHs) GH28 ADZ99366.1 endo-polygalacturonase ttt:THITE_122351 Thermothielavioides terrestris 66.0661 68.8 447.588
Glycoside Hydrolases (GHs) GH28 AEA08948.1 endo-polygalacturonase (Fragment) lep:LEPTO7376_RS11715 Leptolyngbya sp. 28.0488 100.0 31.5722
Glycoside Hydrolases (GHs) GH28 ADZ79437.1 Glycoside hydrolase family 28 shg:SPH21_RS14370 Sphingobacterium sp. 21 99.4475 100.0 1086.25
Glycoside Hydrolases (GHs) GH28 ADZ77054.1 Glycoside hydrolase family 28 shg:SPH21_RS02325 Sphingobacterium sp. 21 100.0 100.0 1019.22
Glycoside Hydrolases (GHs) GH28 ADZ77070.1 Glycoside hydrolase family 28 shg:SPH21_RS02415 Sphingobacterium sp. 21 100.0 100.0 914.45
Glycoside Hydrolases (GHs) GH28 ADZ77076.1 Glycoside hydrolase family 28 shg:SPH21_RS02450 Sphingobacterium sp. 21 100.0 100.0 925.235
Glycoside Hydrolases (GHs) GH28 ADZ78856.1 Glycoside hydrolase family 28 shg:SPH21_RS11345 Sphingobacterium sp. 21 99.4197 100.0 1042.34
Glycoside Hydrolases (GHs) GH28 ADZ78874.1 Glycoside hydrolase family 28 shg:SPH21_RS11435 Sphingobacterium sp. 21 99.4318 100.0 1056.2
Glycoside Hydrolases (GHs) GH28 ADZ79034.1 Glycoside hydrolase family 28 shg:SPH21_RS12290 Sphingobacterium sp. 21 100.0 98.46 927.546
Glycoside Hydrolases (GHs) GH28 AEC01281.1 Polygalacturonase scc:SPICO_RS00195 Parasphaerochaeta coccoides DSM 17374 94.7712 100.0 877.47
Glycoside Hydrolases (GHs) GH28 AEE51001.1 Glycoside hydrolase family 28 hhy:HALHY_RS15795 Haliscomenobacter hydrossis DSM 1100 95.4887 100.0 1019.99
Glycoside Hydrolases (GHs) GH28 AEE54616.1 galacturonan 1,4-alpha-galacturonidase hhy:HALHY_RS34000 Haliscomenobacter hydrossis DSM 1100 99.1718 100.0 982.63
Glycoside Hydrolases (GHs) GH28 AEE17954.1 Polygalacturonase tbe:ST1945 Treponema brennaborense 97.7728 100.0 909.442
Glycoside Hydrolases (GHs) GH28 AEF23123.1 Exo-poly-alpha-galacturonosidase pfv:PSEFU_RS15825 Pseudomonas fulva 12-X 99.8276 95.39 1173.69
Glycoside Hydrolases (GHs) GH28 AEF18063.1 Polygalacturonase txy:THEXY_RS10385 Thermoanaerobacterium xylanolyticum LX-11 97.1042 100.0 1021.92
Glycoside Hydrolases (GHs) GH28 AEG50712.1 Glycoside hydrolase family 28 sch:SPHCH_RS15460 Sphingobium chlorophenolicum L-1 97.3029 100.0 966.452
Glycoside Hydrolases (GHs) GH28 AEG69091.1 Exo-poly-galacturonosidase protein rsn:RSPO_RS08500 Ralstonia solanacearum Po82 97.8602 95.76 1366.29
Glycoside Hydrolases (GHs) GH28 AEG69091.1 Exo-poly-galacturonosidase protein gm06042:UW163_RS14455 Ralstonia solanacearum 97.8602 95.76 1366.29
Glycoside Hydrolases (GHs) GH28 ADT82706.1 Endopolygalacturonase ath:AT3G59850 Arabidopsis thaliana 64.2487 98.21 535.798
Glycoside Hydrolases (GHs) GH28 AEG74026.1 Endopolygalacturonase (Fragment) afm:AFUA_1G17220 Aspergillus fumigatus Af293 73.0769 100.0 222.631
Glycoside Hydrolases (GHs) GH28 AEH50492.1 Glycoside hydrolase family 28 tta:THETH_RS01990 Pseudothermotoga thermarum DSM 5069 97.4757 100.0 1012.29
Glycoside Hydrolases (GHs) GH28 AEJ18788.1 Polygalacturonase scd:ST1129 Gracilinema caldarium DSM 7334 100.0 100.0 968.378
Glycoside Hydrolases (GHs) GH28 AEI42392.1 galacturonan 1,4-alpha-galacturonidase pms:KNP414_RS17345 Paenibacillus mucilaginosus KNP414 100.0 100.0 1004.59
Glycoside Hydrolases (GHs) GH28 AEI46300.1 Pectate lyase superfamily protein domain-containing protein pms:KNP414_RS35155 Paenibacillus mucilaginosus KNP414 98.9858 97.43 998.423
Glycoside Hydrolases (GHs) GH28 AEI44670.1 Glycoside hydrolase family 28 pms:KNP414_RS27640 Paenibacillus mucilaginosus KNP414 100.0 100.0 1079.7
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024