Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1791551 - 1791575 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) ▼ Normalized score of GhostX
Glycoside Hydrolases (GHs) GH28 AFB33588.1 Polygalacturonase (Fragment) ath:AT3G62110 Arabidopsis thaliana 56.5217 100.0 170.629
Glycoside Hydrolases (GHs) GH28 AFB33586.1 Polygalacturonase (Fragment) ath:AT3G62110 Arabidopsis thaliana 57.971 100.0 170.244
Glycoside Hydrolases (GHs) GH28 AFI89393.1 Exo-poly-alpha-D-galacturonosidase pec:W5S_RS06365 Pectobacterium parmentieri 100.0 100.0 1327.0
Glycoside Hydrolases (GHs) GH28 AEY96546.1 ago:AGOS_ADR327W Eremothecium gossypii ATCC 10895 96.1957 100.0 728.013
Glycoside Hydrolases (GHs) GH28 AEY96546.1 gm04783:FAGOS_FADR327W Eremothecium gossypii FDAG1 96.1957 100.0 728.013
Glycoside Hydrolases (GHs) GH28 AFK47544.1 Pectin lyase superfamily protein 11441243 ath:AT1G19170 Arabidopsis thaliana 74.6835 100.0 721.079
Glycoside Hydrolases (GHs) GH28 AGH76201.1 Endopolygalacturonase 66909859 xci:XCAW_RS18860 Xanthomonas citri subsp. citri Aw12879 98.4881 100.0 903.664
Glycoside Hydrolases (GHs) GH28 AGH76201.1 Endopolygalacturonase 66909859 xac:XAC_RS03430 Xanthomonas axonopodis 98.4881 100.0 903.664
Glycoside Hydrolases (GHs) GH28 AFK60098.1 Glycosyl hydrolase efu:HMPREF0351_12474 Enterococcus faecium DO 100.0 100.0 644.425
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein gm05449:AMR85_RS05940 Enterococcus faecium 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein gm05829:AWJ25_RS13020 Enterococcus faecium 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein efu:HMPREF0351_12473 Enterococcus faecium DO 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein efc:EFAU004_RS12690 Enterococcus faecium Aus0004 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein gm06041:UB18_RS02130 Enterococcus faecium 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60097.1 Pentapeptide repeat-containing protein gm05544:AQ614_RS01730 Enterococcus faecium 100.0 100.0 249.21
Glycoside Hydrolases (GHs) GH28 AFK60104.1 Pectin lyase gm06041:UB18_RS02100 Enterococcus faecium 98.8764 100.0 902.894
Glycoside Hydrolases (GHs) GH28 AFK60104.1 Pectin lyase efc:EFAU004_RS12720 Enterococcus faecium Aus0004 98.8764 100.0 902.894
Glycoside Hydrolases (GHs) GH28 AFK60104.1 Pectin lyase gm06403:AX771_12580 Enterococcus faecium 98.8764 100.0 902.894
Glycoside Hydrolases (GHs) GH28 AFK60104.1 Pectin lyase efu:HMPREF0351_12480 Enterococcus faecium DO 98.8764 100.0 902.894
Glycoside Hydrolases (GHs) GH28 AFK60104.1 Pectin lyase gm05544:AQ614_RS01700 Enterococcus faecium 98.8764 100.0 902.894
Glycoside Hydrolases (GHs) GH28 AGM09490.1 Endopolygalacturonase aoi:AORI_RS75560 Amycolatopsis orientalis HCCB10007 96.8958 100.0 892.878
Glycoside Hydrolases (GHs) GH28 AGO12793.1 endo-polygalacturonase gm02958:AACERI_AACERIADR327W [Ashbya] aceris (nom. inval.) 96.338 100.0 702.205
Glycoside Hydrolases (GHs) GH28 AFJ87867.1 Polygalacturonase buk:MYA_RS16980 Burkholderia sp. KJ006 96.988 100.0 1320.45
Glycoside Hydrolases (GHs) GH28 AFK35576.1 Polygalacturonase ath:AT3G62110 Arabidopsis thaliana 58.1921 100.0 206.068
Glycoside Hydrolases (GHs) GH28 AFK47101.1 Polygalacturonase ath:AT5G17200 Arabidopsis thaliana 42.1053 100.0 91.2781
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024