Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1793076 - 1793100 of 1794267 in total
CAZy Enzyme Classes ▲ CAZy Family GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL9 ANE46166.1 Right handed beta helix domain-containing protein rlg:RLEG_RS08665 Rhizobium leguminosarum 25.9375 87.07 145.591
Polysaccharide Lyases (PLs) PL9 BAV13161.1 Pectate lyase ccb:CLOCEL_RS03730 Clostridium cellulovorans 743B 94.012 100.0 632.869
Polysaccharide Lyases (PLs) PL9 SOS14866.1 Pectate lyase gm04502:PSYRH_RS21535 Pseudomonas syringae pv. syringae HS191 95.6627 100.0 836.639
Polysaccharide Lyases (PLs) PL9_1 ATP10030.1 Pectate lyase gap:GAPWK_RS00035 Gilliamella apicola 44.808 93.73 594.349
Polysaccharide Lyases (PLs) PL9 AYM52716.1 Parallel beta-helix repeat protein gm04396:MFUL124B02_RS39905 Myxococcus fulvus 124B02 25.7206 93.56 78.9517
Polysaccharide Lyases (PLs) PL9 AZP16876.1 Pectate lyase sma:SAP1_RS32890 Streptomyces avermitilis MA-4680 = NBRC 14893 80.8108 100.0 609.757
Polysaccharide Lyases (PLs) PL9 QAA30980.1 Pectate lyase gm04987:CDLVIII_RS20840 Clostridium sp. DL-VIII 44.8071 95.19 268.085
Polysaccharide Lyases (PLs) PL9 AXA91222.1 Pectate lyase gm05703:ACA40_RS04320 Pseudomonas syringae pv. lapsa 66.3291 84.58 562.762
Polysaccharide Lyases (PLs) PL9 AYC42228.1 Pectate lyase L sma:SAP1_RS32890 Streptomyces avermitilis MA-4680 = NBRC 14893 79.7297 100.0 600.127
Polysaccharide Lyases (PLs) PL9 BAF59283.1 Right handed beta helix domain-containing protein pth:PTH_RS05735 Pelotomaculum thermopropionicum SI 99.7059 100.0 1402.88
Polysaccharide Lyases (PLs) PL9 CBK42407.1 Right handed beta helix domain-containing protein nde:ST2677 Nitrospira defluvii 99.3464 100.0 926.391
Polysaccharide Lyases (PLs) PL9 CCK31004.1 Secreted pectate lyase sdv:BN159_RS32820 Streptomyces davaonensis JCM 4913 90.0 100.0 675.241
Polysaccharide Lyases (PLs) PL9 AFZ34149.1 Carbohydrate binding family 6 scs:STA7437_RS02655 Stanieria cyanosphaera PCC 7437 100.0 37.79 627.091
Polysaccharide Lyases (PLs) PL9 CAG75452.1 Pectate lyase eca:ECA_RS12505 Pectobacterium carotovorum 96.3387 93.37 869.381
Polysaccharide Lyases (PLs) PL9 BAC74093.1 Secreted pectate lyase sma:SAP1_RS32910 Streptomyces avermitilis MA-4680 = NBRC 14893 86.4935 100.0 664.84
Polysaccharide Lyases (PLs) PL9 BAC74089.1 Secreted pectate lyase sma:SAP1_RS32890 Streptomyces avermitilis MA-4680 = NBRC 14893 89.1892 100.0 666.381
Polysaccharide Lyases (PLs) PL9_1 ARU51409.1 Pectate lyase domain-containing protein ido:I598_2468 Isoptericola dokdonensis DS-3 74.5575 100.0 1353.58
Polysaccharide Lyases (PLs) PL9_1 ASZ49107.1 Exopolygalacturonate lyase gm05293:FORC8_RS15555 Vibrio parahaemolyticus 98.7871 100.0 1466.83
Polysaccharide Lyases (PLs) PL9_1 ASV63913.1 Pectate lyase (Fragment) gm05084:DXXMK7_RS09630 Dickeya sp. MK7 99.3166 100.0 897.501
Polysaccharide Lyases (PLs) PL9_1 ATC64553.1 Ig-like domain-containing protein cpi:CPIN_RS00370 Chitinophaga pinensis DSM 2588 62.1554 48.71 499.59
Polysaccharide Lyases (PLs) PL9_1 ATC63118.1 Pectate lyase ote:OTER_RS09785 Opitutus terrae PB90-1 65.6682 95.17 602.438
Polysaccharide Lyases (PLs) PL9 AWL05289.1 Uncharacterized protein hse:HSERO_RS13725 Herbaspirillum seropedicae SmR1 52.4313 99.78 458.759
Polysaccharide Lyases (PLs) PL9 AWL07591.1 Right handed beta helix domain-containing protein samy:DB32_RS30005 Sandaracinus amylolyticus 43.7666 98.43 287.73
Polysaccharide Lyases (PLs) PL9 AWN40540.1 Right handed beta helix domain-containing protein mex:MEXT_RS17925 Methylorubrum extorquens PA1 50.6849 61.96 375.941
Polysaccharide Lyases (PLs) PL9 AWU95453.1 DUF1565 domain-containing protein samy:DB32_RS30005 Sandaracinus amylolyticus 41.8803 56.43 257.684
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024