Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1793126 - 1793150 of 1794267 in total
CAZy Enzyme Classes CAZy Family GenBank Protein Name Gene ID ▲ MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Glycoside Hydrolases (GHs) GH28 ATP54717.1 Polygalacturonase eel:EUBELI_RS07660 [Eubacterium] eligens ATCC 27750 49.2481 100.0 489.96
Glycoside Hydrolases (GHs) GH28 ATY65544.1 Exo-polygalacturonase gm06431:DCS_04140 Drechmeria coniospora 52.2353 94.44 452.981
Glycoside Hydrolases (GHs) GH28 ATP17470.1 Exo-poly-alpha-D-galacturonosidase ccs:CCNA_00608 Caulobacter vibrioides NA1000 60.9108 100.0 658.677
Glycoside Hydrolases (GHs) GH28 ARK29543.1 Polygalacturonase pmq:PM3016_RS35940 Paenibacillus mucilaginosus 3016 66.6667 98.42 707.597
Glycoside Hydrolases (GHs) GH28 ARU27996.1 Glycoside hydrolase cja:CJA_RS00860 Cellvibrio japonicus Ueda107 66.4368 99.54 620.157
Glycoside Hydrolases (GHs) GH28 ARU95670.1 Glycoside hydrolase eas:PENTAS01ST54 Enterobacter asburiae LF7a 64.4144 99.32 593.193
Glycoside Hydrolases (GHs) GH28 ARV96931.1 Endopolygalacturonase (Fragment) gm06271:VM1G_07780 Valsa mali 67.1756 100.0 182.956
Glycoside Hydrolases (GHs) GH28 ARX86828.1 Glycoside hydrolase gm04952:SCLAV_RS24855 Streptomyces clavuligerus 74.2664 85.19 693.345
Glycoside Hydrolases (GHs) GH28 ARX86828.1 Glycoside hydrolase gm04891:SCN_RS25195 Streptomyces clavuligerus 74.2664 85.19 693.345
Glycoside Hydrolases (GHs) GH28 ARX87623.1 Glycoside hydrolase gm04891:SCN_RS24860 Streptomyces clavuligerus 75.4505 99.55 695.271
Glycoside Hydrolases (GHs) GH28 ARX87623.1 Glycoside hydrolase gm04952:SCLAV_RS24545 Streptomyces clavuligerus 75.4505 99.55 695.271
Glycoside Hydrolases (GHs) GH28 ASL70691.1 Polygalacturonase (Fragment) gm05454:RSUY_RS19850 Ralstonia solanacearum 97.3684 100.0 309.686
Glycoside Hydrolases (GHs) GH28 ASM94209.1 endo-polygalacturonase ttt:THITE_2116431 Thermothielavioides terrestris 60.5714 92.83 465.307
Glycoside Hydrolases (GHs) GH28 ASQ41003.1 Polygalacturonase ath:AT5G14650 Arabidopsis thaliana 64.133 81.9 546.584
Glycoside Hydrolases (GHs) GH28 ASQ97589.1 Coagulation factor 5/8 type domain-containing protein ams:AMIS_RS29440 Actinoplanes missouriensis 431 67.5889 92.67 700.279
Glycoside Hydrolases (GHs) GH28 AST57058.1 Polygalacturonase ttm:TTHE_RS11930 Thermoanaerobacterium thermosaccharolyticum DSM 571 96.5318 100.0 1016.91
Glycoside Hydrolases (GHs) GH28 ASW00677.1 Endopolygalacturonase bpy:BPHYT_RS24125 Paraburkholderia phytofirmans PsJN 91.543 100.0 1269.6
Glycoside Hydrolases (GHs) GH28 ASY59706.1 Polygalacturonase sfh:SFHH103_RS26965 Sinorhizobium fredii HH103 85.7143 99.54 770.385
Glycoside Hydrolases (GHs) GH28 ASY65206.1 Polygalacturonase sfh:SFHH103_RS26965 Sinorhizobium fredii HH103 81.6742 99.77 728.013
Glycoside Hydrolases (GHs) GH28 ATA58400.1 endo-polygalacturonase ang:ANI_1_2518024 Aspergillus niger CBS 513.88 85.124 100.0 634.795
Glycoside Hydrolases (GHs) GH28 ATC64230.1 Exo-poly-alpha-D-galacturonosidase ote:OTER_RS18785 Opitutus terrae PB90-1 66.4193 95.22 727.628
Glycoside Hydrolases (GHs) GH28 ATC64106.1 Glycoside hydrolase rmr:RMAR_RS11935 Rhodothermus marinus DSM 4252 63.7002 86.08 569.696
Glycoside Hydrolases (GHs) GH28 ATZ46059.1 endo-polygalacturonase ang:ANI_1_1980014 Aspergillus niger CBS 513.88 65.8263 93.94 465.307
Glycoside Hydrolases (GHs) GH28 ATZ49852.1 galacturonan 1,4-alpha-galacturonidase gm06271:VM1G_05725 Valsa mali 64.1256 97.8 584.719
Glycoside Hydrolases (GHs) GH28 ARF90243.1 gm06124:A3203_RS34100 Burkholderia cenocepacia 90.3448 100.0 1310.05
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024