Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1793276 - 1793300 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL9_1 AVF37596.1 Pectate lyase rah:RAHAQ_RS22270 Rahnella aceris 81.3019 100.0 1212.59
Polysaccharide Lyases (PLs) PL9_1 AVV46051.1 Pectate lyase sbh:SBI_RS02610 Streptomyces bingchenggensis BCW-1 76.1229 95.05 684.485
Polysaccharide Lyases (PLs) PL9_1 AYM72231.1 DUF1565 domain-containing protein eft:M395_RS02515 Enterococcus faecium T110 98.6989 98.8 2136.69
Polysaccharide Lyases (PLs) PL9_1 BAC87940.1 Pectate lyase L csd:CLST_RS00825 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 98.4677 100.0 2433.29
Polysaccharide Lyases (PLs) PL9_1 BAC87940.1 Pectate lyase L css:CST_RS00810 Thermoclostridium stercorarium subsp. stercorarium DSM 8532 98.4677 100.0 2433.29
Polysaccharide Lyases (PLs) PL9_1 BAB04213.1 Exopolygalacturonate lyase bha:BH_RS02665 Halalkalibacterium halodurans C-125 99.6366 100.0 2728.35
Polysaccharide Lyases (PLs) PL9_1 AWM41538.1 Pectate lyase gm04955:MUCPA_RS07815 Mucilaginibacter paludis DSM 18603 56.3246 94.36 490.345
Polysaccharide Lyases (PLs) PL9_1 SLM62404.1 Pectate lyase L gm05083:DXXDW0440_RS12555 Dickeya sp. DW 0440 98.3645 97.94 862.062
Polysaccharide Lyases (PLs) PL9_1 SLM63028.1 Pectate lyase gm05083:DXXDW0440_RS09105 Dickeya sp. DW 0440 98.5981 97.49 872.078
Polysaccharide Lyases (PLs) PL9_1 SLM65220.1 Exopolygalacturonate lyase gm05083:DXXDW0440_RS18770 Dickeya sp. DW 0440 99.1826 100.0 1443.33
Polysaccharide Lyases (PLs) PL9_1 AYZ17867.1 Right-handed parallel beta-helix repeat-containing protein gm06351:KOJKO3_RS28070 Klebsiella oxytoca 94.3292 100.0 1385.93
Polysaccharide Lyases (PLs) PL9_1 AWF38456.1 gm04245:AB184_RS19055 Klebsiella oxytoca 99.1701 100.0 1426.38
Polysaccharide Lyases (PLs) PL9_1 AWF38456.1 gm04246:AB181_RS19320 Klebsiella oxytoca 99.1701 100.0 1426.38
Polysaccharide Lyases (PLs) PL9_1 BAS43604.1 gm06351:KOJKO3_RS28070 Klebsiella oxytoca 100.0 100.0 1447.18
Polysaccharide Lyases (PLs) PL9_1 AYZ53012.1 gm04245:AB184_RS19055 Klebsiella oxytoca 98.8935 100.0 1421.37
Polysaccharide Lyases (PLs) PL9_1 AYZ53012.1 gm04246:AB181_RS19320 Klebsiella oxytoca 98.8935 100.0 1421.37
Polysaccharide Lyases (PLs) PL9_1 QAS65312.1 kom:HR38_RS05050 Klebsiella oxytoca 99.7234 100.0 1442.17
Polysaccharide Lyases (PLs) PL9_1 QBG10956.1 gm04245:AB184_RS19055 Klebsiella oxytoca 93.2227 100.0 1360.13
Polysaccharide Lyases (PLs) PL9_1 QBG10956.1 gm04246:AB181_RS19320 Klebsiella oxytoca 93.2227 100.0 1360.13
Polysaccharide Lyases (PLs) PL9_1 AWT18556.1 gm06351:KOJKO3_RS28070 Klebsiella oxytoca 100.0 100.0 1447.18
Polysaccharide Lyases (PLs) PL9_1 AYO06941.1 gm05568:FORC4_RS15880 Vibrio parahaemolyticus 98.6523 100.0 1467.21
Polysaccharide Lyases (PLs) PL9_1 QDG83566.1 gm05937:AL464_RS21175 Vibrio parahaemolyticus 98.3827 100.0 1459.89
Polysaccharide Lyases (PLs) PL9_1 AVW97938.1 gm05465:FORC6_RS16290 Vibrio parahaemolyticus 98.3827 100.0 1464.13
Polysaccharide Lyases (PLs) PL9_1 AWG85553.1 gm05568:FORC4_RS15880 Vibrio parahaemolyticus 98.5175 100.0 1464.51
Polysaccharide Lyases (PLs) PL9_1 AWG81515.1 gm05465:FORC6_RS16290 Vibrio parahaemolyticus 98.7871 100.0 1467.98
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024