Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Guidelines
MIRAGE
Microbial Genome Database (MBGD)

MBGD is a database for comparative analysis of completely sequenced microbial genomes, the number of which is now growing rapidly. A list of sequences with high scores in amino acid sequences registered in MBGD against the database sequences of glycan-related genes and the results of amino acid homology search by GhostX.
Nucleic Acids Res. 47:D382-D389 (2019)

Source Last Updated
Microbial Genome Database (MBGD) October 23, 2024
Displaying entries 1794201 - 1794225 of 1794267 in total
CAZy Enzyme Classes CAZy Family ▲ GenBank Protein Name Gene ID MBGD Organism Identity(%) Percentage of Alignment Length(%) Normalized score of GhostX
Polysaccharide Lyases (PLs) PL9_3 CEI61613.1 Right handed beta helix domain-containing protein fgr:FG03131.1 Fusarium graminearum PH-1 95.74 100 788.88
Polysaccharide Lyases (PLs) PL9_3 AVT38454.1 Pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 59.07 95 478.02
Polysaccharide Lyases (PLs) PL9_3 ACU36973.1 RNA polymerase, sigma-24 subunit, ECF subfamily ami:AMIR_RS15280 Actinosynnema mirum DSM 43827 93.95 100 1298.11
Polysaccharide Lyases (PLs) PL9_3 CBG75160.1 Putative secreted pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 90.66 98 726.86
Polysaccharide Lyases (PLs) PL9_3 CBG74052.1 Putative secreted protein scb:SCAB_RS33775 Streptomyces scabiei 87.22 87.84 96 660.6
Polysaccharide Lyases (PLs) PL9_3 CCT61106.1 Right handed beta helix domain-containing protein gm06478:FFUJ_11652 Fusarium fujikuroi IMI 58289 69.25 98 558.53
Polysaccharide Lyases (PLs) PL9_3 BAE63970.1 Right handed beta helix domain-containing protein aor:AOR_1_220074 Aspergillus oryzae RIB40 97.96 93 783.87
Polysaccharide Lyases (PLs) PL9_3 SDT25290.1 Right handed beta helix region sbh:SBI_RS08895 Streptomyces bingchenggensis BCW-1 61.19 94 457.22
Polysaccharide Lyases (PLs) PL9_3 SDT60488.1 RNA polymerase sigma factor ams:AMIS_RS08650 Actinoplanes missouriensis 431 62.68 99 852.82
Polysaccharide Lyases (PLs) PL9_3 SBO96337.1 Pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 72.07 71 560.07
Polysaccharide Lyases (PLs) PL9_3 SHI28350.1 Right handed beta helix region sma:SAP1_RS32910 Streptomyces avermitilis MA-4680 = NBRC 14893 79.62 95 602.82
Polysaccharide Lyases (PLs) PL9_3 AQZ70497.1 Pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 73.5 96 561.99
Polysaccharide Lyases (PLs) PL9_3 AZQ33905.1 Pectate lyase sdv:BN159_RS32830 Streptomyces davaonensis JCM 4913 77.34 100 603.21
Polysaccharide Lyases (PLs) PL9_3 AZS88016.1 Pectate lyase sma:SAP1_RS32890 Streptomyces avermitilis MA-4680 = NBRC 14893 79.22 89 561.22
Polysaccharide Lyases (PLs) PL9_3 BBH63877.1 RNA polymerase sigma factor ams:AMIS_RS08650 Actinoplanes missouriensis 431 50.43 100 672.54
Polysaccharide Lyases (PLs) PL9_3 BBH67212.1 RNA polymerase sigma factor ams:AMIS_RS08650 Actinoplanes missouriensis 431 73.01 100 1000.35
Polysaccharide Lyases (PLs) PL9_3 BBJ44663.1 Pectate lyase svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 94.99 98 771.93
Polysaccharide Lyases (PLs) PL9_3 AEM86339.1 Pectate lyase svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 98.03 100 807.75
Polysaccharide Lyases (PLs) PL9_3 CCA76167.1 Related to pectate lyase L scb:SCAB_RS39240 Streptomyces scabiei 87.22 56.16 81 419.85
Polysaccharide Lyases (PLs) PL9_3 CCT72704.1 Related to pectate lyase L gm06478:FFUJ_12595 Fusarium fujikuroi IMI 58289 95.43 100 766.15
Polysaccharide Lyases (PLs) PL9_3 CCT75620.1 Related to pectate lyase L gm06478:FFUJ_11652 Fusarium fujikuroi IMI 58289 100.0 100 800.82
Polysaccharide Lyases (PLs) PL9_3 AGZ94308.1 Pectate lyase scb:SCAB_RS39240 Streptomyces scabiei 87.22 68.03 72 521.16
Polysaccharide Lyases (PLs) PL9_3 AHE14911.1 DUF1565 domain-containing protein svl:STRVI_RS32550 Streptomyces violaceusniger Tu 4113 59.65 85 275.79
Polysaccharide Lyases (PLs) PL9_3 AXE90317.1 Pectate lyase L sbh:SBI_RS08895 Streptomyces bingchenggensis BCW-1 65.07 100 374.02
Polysaccharide Lyases (PLs) PL9_3 BAL86940.1 RNA polymerase sigma factor ams:AMIS_RS08650 Actinoplanes missouriensis 431 92.43 97 1274.23
Download data in CSV format Download data in TSV format Download data in JSON format
About Release Notes Help Feedback

Click here to visit the beta site.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.2.1

Last updated: April 7, 2025