GlyCosmos Portal

Danio rerio (zebrafish)

Summary

Taxonomy ID: 7955
PubChem Taxonomy: 7955

Genes (748) Glycans (175) Glycoproteins (596) Lectins (18) Pathways (261)

Displaying entries **76 - 100** of **261** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol
Negative regulation of FGFR1 signaling	Anosmin 1b Anosmin-1 Fgf23 Fibroblast growth factor 17 Fibroblast growth factor 3 Fibroblast growth factor 8 Fibroblast growth factor receptor 1-A Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Klotho Mitogen-activated protein kinase Mitogen-activated protein kinase Putative fibroblast growth factor 1	B3DGE3 F1RC43 O57341 P48802 Q1MT36 Q1XG76 Q38PL0 Q5MK87 Q5TLE1 Q5TLE2 Q6PBT8 Q6SJP8 Q7ZVK8 Q7ZW72 Q8AY90 Q90Z00 Q9DFC9 Q9IAR4	ERK1 anos1a anos1b anosmin-1a anosmin-1b dob fc89b01 fgf-1 fgf-10 fgf-3 fgf-8 fgf1 fgf10 fgf10a fgf17 fgf17b fgf2 fgf20a fgf22 fgf23 fgf3 fgf4 fgf5 fgf6b fgf8 fgf8a fgfr1 fgfr1a fi06b09 id:ibd5158 kal1.1 kal1.2 kal1a kal1b kl mapk1 mapk3 si:dkey-21e2.2 si:dkeyp-74c5.3 wu:fb05c08 wu:fc89b01 wu:fd11d03 wu:fi06b09 wu:fl91z45 zERK1 zERK2 zgc:109774 zgc:194535
Neurophilin interactions with VEGF and VEGFR	Neuropilin-1a Vascular endothelial growth factor receptor 2	Q5GIT4 Q8QFX6	flk1b kdr kdrb np-1 nrp1 nrp1a
VEGF binds to VEGFR leading to receptor dimerization	C-fos induced growth factor Vascular endothelial growth factor A-A Vascular endothelial growth factor C Vascular endothelial growth factor receptor 2 Vascular endothelial growth factor receptor 3	O73682 Q208T6 Q5GIT4 Q5MD89 Q7T3I6	figf flk1b flt-4 flt4 kdr kdrb vegf vegf-d vegfa vegfaa vegfc vegfd vegfr3
Condensation of Prophase Chromosomes	Condensin-2 complex subunit D3 Condensin-2 complex subunit G2 Condensin-2 complex subunit H2 Cyclin-dependent kinase 1 G2/mitotic-specific cyclin-B1 Histone H2A.V Histone H2A Histone H2A Histone H2A Histone H2B 1/2 Histone H2B 3 Histone H2B Histone H2B Histone H2B Histone H4 Histone lysine demethylase PHF8 N-lysine methyltransferase KMT5A-A Retinoblastoma 1 Serine/threonine-protein kinase PLK Structural maintenance of chromosomes protein Uncharacterized protein LOC100126107	A0JMQ4 A3KPR4 A7E2M8 A7MCA8 B3DJF8 B8A5K9 E7FH61 P0CH95 Q071E0 Q0Z946 Q4KMI8 Q5BJA5 Q5RH01 Q5XJK2 Q6PC60 Q71PD7 Q7SZF2 Q7T3L7 Q7ZTT0 Q9IB44 R4GE15	LOC100150038 LOC100329358 LOC100331412 LOC100332229 LOC103908680 LOC108181627 LOC562770 LOC570661 LOC794549 SMC2L1 cb267 cb525 cb636 ccnb ccnb1 cdc2 cdk1 cycb cycb1 fb92e05 h2af1al h2afvb h2afvl h2afx1 h2afza h2av h2ax1 h2az2a h2az2b hist1h4l hist2h2l id:ibd2253 ik:tdsubc_2d1 im:6896397 kmt5aa ncapd3 ncapg2 ncaph2 phf8 plk plk1 rb1 set8a setd8 setd8a si:ch211-113a14.17 si:ch211-113a14.22 si:ch211-113a14.29 si:ch211-113a14.6 si:ch73-36p18.4 si:dkey-108k21.12 si:dkey-108k21.18 si:dkey-108k21.28 si:dkey-23a13.7 smc2 wu:fa19g04 wu:fb16d01 wu:fb16e07 wu:fb37g11 wu:fb76g03 wu:fb92e05 wu:fc30e01 wu:fi21c01 xx:tdsubc_2d1 zeh1628 zgc:112234 zgc:154147 zgc:165555 zgc:173585 zgc:173587 zgc:194998 zgc:55326 zgc:55549 zgc:56685 zgc:92032
VEGFR2 mediated vascular permeability	3-phosphoinositide-dependent protein kinase 1 Cadherin-5 Catenin alpha-1 Catenin beta-1 Junction plakoglobin a non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	E7EXT6 F1QGH7 Q68SP4 Q6DG42 Q6NZV1 Q8UUX0 Q9PVF7 Q9PVF8	akt2 akt3b cb422 cb80 cb945 cdh5 ctnna1 ctnnb1 jup jupa kinase pak2 pak2a pdpk1b si:dz198m22.1 wu:fb71h01 zgc:77318 zgc:91798
Acyl chain remodelling of PS	Cytosolic phospholipase A2 Group XIIA secretory phospholipase A2 precursor Phospholipase A1 member A Phospholipase A2 Retinoic acid receptor responder 3-like	A3KNJ5 P50392 Q6DHK9 Q6DHQ7 Q6NYZ4	cpla2 pla1a pla2g10 pla2g12a pla2g4 pla2g4a rarres3l zgc:162119
Apoptotic execution phase	Caspase 10, apoptosis-related cysteine peptidase Dynamin-1-like protein Endoplasmic reticulum transmembrane protein non-specific serine/threonine protein kinase	A3KP89 E7EXV8 Q7SXN5 Q7ZUJ4	bcap31 casp10 casp8l2 dnm1l si:bz30i22.4 si:rp71-30i22.4 stk24a zgc:163071 zgc:56389
Negative regulation of the PI3K/AKT network	Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Tribbles homolog 3 non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	E7EXT6 Q6NY44 Q7ZZ56 Q8UUX0	akt2 akt3b cb945 fa11a08 fb73f10 fc83f12 fd16b10 fk90e11 pten ptenb si:bz1g13.4 trib3 wu:fa11a08 wu:fb73f10 wu:fc83f12 wu:fd16b10 wu:fk90e11 zgc:76966
Arachidonate metabolism	Cytosolic phospholipase A2 Diacylglycerol O-acyltransferase 2 Fatty-acid amide hydrolase 2-A	P50392 Q4V9F0 Q6DH69	cpla2 dgat2 faah2a pla2g4 pla2g4a
MTOR signalling	14-3-3 protein beta/alpha-B GTP-binding protein Rheb Neutral amino acid transporter 9 Ragulator complex protein LAMTOR2 Ragulator complex protein LAMTOR3 Ragulator complex protein LAMTOR4 Ragulator complex protein LAMTOR5 Ras-related GTP-binding protein Ras-related GTP-binding protein Regulatory-associated protein of MTOR, complex 1 Serine/threonine-protein kinase TOR Target of rapamycin complex subunit lst8 non-specific serine/threonine protein kinase	A0A0R4IFI0 E7EXT6 E7FA90 Q06RG6 Q08BA4 Q0P3X8 Q502N9 Q503S6 Q6DEG4 Q6PC18 Q7T356 Q7ZUI2 Q803V5	RRAGB akt3b frap1 gbl lamtor2 lamtor3 lamtor4 lamtor5 lst8 mapksp1 mlst8 mtor rheb rptor rraga rragc rragca si:dkey-176g4.2 slc38a9 tor wu:fc22h08 wu:fc68h09 ywhab ywhab2 ywhabb zgc:111971 zgc:56499 zgc:73144
LDL clearance	Carboxylic ester hydrolase Low density lipoprotein receptor NPC intracellular cholesterol transporter 2 NPC intracellular cholesterol transporter 2 Neutral cholesterol ester hydrolase 1 O-acyltransferase	B0UYE4 B3DFW4 Q08BF1 Q6DKF1 Q7ZZT0 Q9DGJ3	LOC565099 cbe ces2 ces2a im:6908784 ldlr ldlra nceh1a npc2 npc2.2 si:dkey-21p1.4 si:dkey-38l12.2 soat1 zgc:153863 zgc:193713 zgc:193725 zgc:92416
Inactivation, recovery and regulation of the phototransduction cascade	G protein-coupled receptor kinase Glycylpeptide N-tetradecanoyltransferase 2 Glycylpeptide N-tetradecanoyltransferase Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 1 Guanine nucleotide-binding protein subunit gamma Guanylate cyclase activating protein 4 Guanylate cyclase activator 1C Guanylyl cyclase-activating protein 1 Guanylyl cyclase-activating protein 1 Guanylyl cyclase-activating protein 2 Methionine aminopeptidase 1 Methionine aminopeptidase 2 Protein farnesyltransferase subunit beta Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha Recoverin Rhodopsin kinase grk7-b Rhodopsin S-arrestin	A1L1V1 A7YT82 P35359 Q1XHL7 Q1XHM0 Q4QRK0 Q4V8S2 Q4VBR7 Q6IQG3 Q6NUV2 Q6PBN9 Q6PFM5 Q6ZM98 Q7SXK1 Q8UUX9 Q90WX3 Q90WX4 Q90WX6	GRK1A GUCA1D METAP2 fk56b01 fk56e06 fnta fntb gcap1 gcap2 gcap3 gcap4 gcap5 gnat1 gng1 gngt1 grk1 grk1a grk7-2 grk7b guca1a guca1aa guca1ab.1 guca1b guca1c guca1d guca1e im:2601337 im:6909421 metap1 metap2 metap2b nmt-1 nmt1 nmt1a nmt2 rcv1a rcvrna rho saga si:rp71-1p14.1 wu:fb51d12 wu:fb98h06 wu:fb99h09 wu:fc15d01 wu:fc18a04 wu:fk53d06 wu:fk56b01 wu:fk56e06 wu:fz92f09 zfo2 zgc:110714 zgc:114180 zgc:158397 zgc:66109 zgc:66243 zgc:66250 zgc:73318 zgc:85885 zgc:86774
Class B/2 (Secretin family receptors)	Corticoliberin precursor Corticotropin-releasing factor-binding protein Parathyroid hormone 2 receptor a Parathyroid hormone-related peptide 1 Parathyroid hormone/parathyroid hormone-related peptide receptor Parathyroid hormone Tuberoinfundibular peptide of 39 residues	Q1L5E8 Q5U3N6 Q6DG79 Q6WQ25 Q8QGA2 Q9PVD3 Q9PWB7	PTH crf crh crhb crhbp pth1 pth1a pth1r pth1ra pth2 pth2r pth2ra pthlh pthlha pthr1 pthr2 pthrp si:ch211-286m4.5 tip39 zPTH1R zgc:101864 zgc:123155 zgc:91905
Formation of the cornified envelope	Desmocollin 2-like protein Desmoglein-2.1 Desmoplakin-A Junction plakoglobin a Lipase Plakophilin 3a Plakophilin-2	A0A8M2BID5 B0BF33 F1Q8J9 F1QSQ0 H2EQR6 Q7ZTR9 Q9PVF7	cb80 dsc dsc2 dsc2l dsg2 dsg2.1 dsga dspa fb73g06 jup jupa lipf pkp2 pkp3 pkp3a wu:fa97f09 wu:fb73g06 wu:fk69a12 zgc:136656 zgc:56632
Keratinization	Desmocollin 2-like protein Desmoglein-2.1 Desmoplakin-A Junction plakoglobin a Keratin 18b Keratin 5 Keratin 93 Keratin 95 Keratin 97 Keratin, type II cytoskeletal 8 Plakophilin 3a Plakophilin-2 Uncharacterized protein LOC100009654 Uncharacterized protein LOC768289	A0A8M2BID5 A2RV44 B0BF33 F1Q8J9 F1QSQ0 F1QV31 H2EQR6 Q05AL9 Q1RLR3 Q6DG66 Q6DHU3 Q6NWF6 Q6PHE4 Q9PVF7	cb112 cb80 ckii dsc dsc2 dsc2l dsg2 dsg2.1 dsga dspa jup jupa krt18b krt2-8 krt5 krt8 krt93 krt94 krt95 krt97 krtt1c6 pkp2 pkp3 pkp3a sb:cb112 sb:cb481 wu:fa91c11 wu:fa91g11 wu:fa96h10 wu:fa97f09 wu:fb02h09 wu:fb58f07 wu:fj02d02 wu:fk69a12 wu:fk78b12 zfCKII zgc:136656 zgc:66015
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3	Androgen receptor Histone H2A.V Histone H2A Histone H2A Histone H2A Histone H2B 1/2 Histone H2B 3 Histone H2B Histone H2B Histone H2B Histone H3.2 Histone H3.3 Histone H4 Nuclear receptor coactivator 2 Uncharacterized protein LOC100126107 [histone H3]-trimethyl-L-lysine(9) demethylase protein kinase C	A2RRT0 A3KPR4 A4GT83 A4QNX9 A7E2M8 A7MCA8 B3DJF8 Q0Z946 Q4QRF4 Q5BJA5 Q5XJK2 Q6PC60 Q6PI20 Q71PD7 Q7ZTT0 Q98TW1 R4GE15	LOC100150038 LOC100329358 LOC100331412 LOC100332229 LOC103908680 LOC108181627 LOC562770 LOC570661 LOC794549 NR3C4 ar grip1 h2af1al h2afvb h2afvl h2afx1 h2afza h2av h2ax1 h2az2a h2az2b h3-5 h3f3a h3f3b.1 h3f3c h3f3d hist1h4l hist2h2l im:6896397 jmjd2c kdm4c ncoa2 pkn1b si:ch211-113a14.17 si:ch211-113a14.22 si:ch211-113a14.29 si:ch211-113a14.6 si:ch73-36p18.4 si:dkey-108k21.12 si:dkey-108k21.18 si:dkey-108k21.28 si:dkey-23a13.7 src2 tif2 wu:fd55d07 zgc:112234 zgc:113984 zgc:165555 zgc:173585 zgc:173587 zgc:194998 zgc:56685
Phospholipase C-mediated cascade: FGFR1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma Fgf23 Fibroblast growth factor 17 Fibroblast growth factor 3 Fibroblast growth factor 8 Fibroblast growth factor receptor 1-A Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Klotho Putative fibroblast growth factor 1	B3DGE3 F1RC43 O57341 P48802 Q1XG76 Q38PL0 Q5MK87 Q5TLE1 Q5TLE2 Q6PBT8 Q6SJP8 Q804J6 Q8AY90 Q90Z00 Q9DFC9	dob fc89b01 fgf-1 fgf-10 fgf-3 fgf-8 fgf1 fgf10 fgf10a fgf17 fgf17b fgf2 fgf20a fgf22 fgf23 fgf3 fgf4 fgf5 fgf6b fgf8 fgf8a fgfr1 fgfr1a fj46f04 id:ibd5158 kl plcg1 si:dkey-21e2.2 si:dkeyp-74c5.3 wu:fb05c08 wu:fc89b01 wu:fd11d03 wu:fj46f04 wu:fj57a05 zgc:109774 zgc:194535
PI Metabolism	Tumor necrosis factor alpha-induced protein 8-like protein 1 Tumor necrosis factor alpha-induced protein 8-like protein 3 Tumor necrosis factor, alpha-induced protein 8-like protein 2 B	Q7SZE8 Q7T364 Q7T3D0	tnfaip8 tnfaip8l tnfaip8l1 tnfaip8l2 tnfaip8l2b tnfaip8l3
Adherens junctions interactions	Cadherin 11, osteoblast Cadherin 6 Cadherin-17 Cadherin-1 Cadherin-2 Cadherin-4 Cadherin-5 Cadherin-6 Cell adhesion molecule 1b isoform 1 Nectin 1b Nectin-3-like protein RNase 2 RNase 3 Ribonuclease-like 3	A1L1M6 A5HAK0 A5HAK1 A5HAK2 B0F6R1 B0JYH6 B3DGG4 Q2MLR9 Q58EG3 Q5WN09 Q68SP4 Q90275 Q90X63 Q90Z37	E-cad R-cadherin cadm1b cb903 cdh1 cdh10 cdh10a cdh11 cdh17 cdh2 cdh4 cdh5 cdh6 cdhvn fb65d02 nectin1b nectin3 pac pvrl1b pvrl3l rcad rnasel2 rnasel3 rnasel4 sc:d0664 si:ch211-139g14.6 vnc wu:fb65d02 zgc:103673 zgc:136316
Response to elevated platelet cytosolic Ca2+	Protein kinase C beta type	Q7SY24	prkcb1 prkcbb
G beta:gamma signalling through PI3Kgamma	3-phosphoinositide-dependent protein kinase 1 Rho-related GTP-binding protein RhoA-C non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	E7EXT6 Q6NZV1 Q7T2E8 Q8UUX0	akt2 akt3b cb945 pdpk1b rhoac zgc:77318
Ovarian tumor domain proteases	Cellular tumor antigen p53 E2 ubiquitin-conjugating enzyme E3 ubiquitin-protein ligase RNF128 precursor Estrogen receptor Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Rho-related GTP-binding protein RhoA-C TNF receptor-associated factor 6 TNF receptor-associated factor Transitional endoplasmic reticulum ATPase Ubiquitin thioesterase OTU1 Ubiquitin thioesterase zranb1-B Ubiquitin thioesterase ubiquitinyl hydrolase 1	A0JMQ9 P57717 P79734 Q567B1 Q6DEG0 Q6DH16 Q6IWL4 Q6NW80 Q6NX00 Q6PC58 Q7T2E8 Q7ZU99 Q7ZZ56	cdc48 drp53 esr esr1 fa11a08 fb17f04 fb73f10 fc83f12 fd16b10 fk90e11 nr3a1 otub1a otub1l otud3 pten ptenb rhoac rnf128 rnf128a si:bz1g13.4 tp53 traf3 traf6 ube2d1 ube2d1b vcp wu:fa11a08 wu:fb17f04 wu:fb57h05 wu:fb73f10 wu:fc16h06 wu:fc83f12 wu:fd16b10 wu:fk90e11 yod1 zgc:73096 zgc:77843 zgc:85911 zgc:92367 zgc:92685 zranb1 zranb1b
O-glycosylation of TSR domain-containing proteins	Beta-1,3-glucosyltransferase GDP-fucose protein O-fucosyltransferase 2 Sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A Sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Ba Spon2b protein Spondin-1 Thrombospondin type-1 domain-containing protein 7A	A0A068F9P7 A7MBS7 B0S641 F1QPQ6 F1R9L1 O42113 Q0V935	F-spondin1 b3galtla b3glcta etID309958.14 fc46a11 mindin2 pofut2 sema5a sema5ba si:dkey-1o1.2 spon1a spon2b thsd7a thsd7aa wu:fa95e03 wu:fc46a11 wu:fi41a04 zgc:100756 zgc:194822
FGFR3b ligand binding and activation	FGF18a Fibroblast growth factor 17 Fibroblast growth factor 8 Fibroblast growth factor receptor 3 Fibroblast growth factor Putative fibroblast growth factor 1	O57341 Q38PL0 Q5TKR8 Q6PBT8 Q6SJP8 Q9I8X3	dob fgf-1 fgf-8 fgf1 fgf17 fgf17b fgf18 fgf18a fgf20a fgf8 fgf8a fgfr3 wu:fb05c08
Cell surface interactions at the vascular wall	CD74 molecule, major histocompatibility complex, class II invariant chain a Carcinoembryonic antigen-related cell adhesion molecule 5 isoform X1 Carcinoembryonic antigen-related cell adhesion molecule 5 precursor Coxsackievirus and adenovirus receptor homolog Endothelial cell-selective adhesion molecule precursor Epithelial cell adhesion molecule precursor Integrin alpha 4 Integrin beta Integrin beta Integrin beta Junctional adhesion molecule 2A Junctional adhesion molecule 3B Junctional adhesion molecule A Macrophage migration inhibitory factor P-selectin glycoprotein ligand 1 precursor Sc Sodium channel subunit beta-2 p-selectin	A0A0R4ICS1 A0A0R4IGV4 A3KPA0 A4JYL4 B0CLV1 B0CLZ7 B3DIV2 E5DV48 E9QJI4 G4WJE8 Q06W28 Q0ZBR7 Q19U09 Q3YAA0 Q568H0 Q66I72 Q90Y50 Q9PUT2	ESAM Iclp-1 JAM MIF SCN2B cb810 cd74a ceacam1 cxadr epcam esam esama f11r f11r.1 hm:zeh0068 iclp1 itga4 itgb1 itgb1b itgb1b.1 itgb1b.2 jam2a jam3b jamb jamc mif sb:cb6 sc:d0175 sc:d0254 scn2b selp selplg si:ch211-260g14.4 si:ch211-264f5.6 tacstd wu:fb11f09 wu:fb12a01 wu:fb13d06 wu:fc07c05 wu:fj17g02 wu:fk94e07 zeh0068 zgc:103642 zgc:110304 zgc:77119 zgc:85632

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