PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
PA-IL (51-kDa)
|
Galactose-alpha-1,3-galactose
|
Disaccharides
|
Gal(a1-3)Gal
|
Binding
|
|||
PA-IL (51-kDa)
|
Galactose-alpha-1,4-galactose
|
Disaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
PA-IIL
|
Blood group H antigen
|
Disaccharides
|
Fuc(a1-2)Gal
|
Binding
|
|||
PA-IL
|
Melibiose
|
Disaccharides
|
Gal(a1-6)Glc
|
Binding
|
|||
RSL (30-kDa proteins)
|
Blood group H antigen
|
Disaccharides
|
Fuc(a1-2)Gal
|
Binding
|
|||
Unknown
|
Blood group H antigen
|
Disaccharides
|
Fuc(a1-2)Gal
|
Binding
|
|||
N-methylphenyl-alanine pili
|
Glucosamine-galactose carbohydrate
|
Disaccharides
|
Binding
|
||||
PsaA (Lary family)
|
N-acetylhexosamine-galactose
|
Disaccharides
|
Binding
|
||||
Unknown
|
Blood group H antigen
|
Disaccharides
|
Saliva
|
Fuc(a1-2)Gal
|
Not Binding
|
||
Adhesins
|
unnamed ligand
|
Disaccharides
|
GalNAc(b1-4)Gal
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01