GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature	Target Source	Glycan Sequence ▲	Binding	PubMed ID
Escherichia coli	S-fimbriae (SfaA)	Seminolipid (Sulfogalactosylglycerolipid)	Glycolipids	Brain endothelial cells	Gal(3SO4)(b1-1)-alkylacylglycerol	Binding	8098039
Escherichia coli	S-fimbriae (SfaA)	Galactosyl sulfatide	Sulfoglycosphingolipids	Brain endothelial cells	Gal(3SO4)(b1-1)Cer	Binding	8098039
Mycoplasma pneumoniae	Unknown	Galactosyl sulfatide	Sulfoglycosphingolipids	Human colon adenocarcinoma cells (WiDr )	Gal(3SO4)(b1-1)Cer	Binding	2470753
Mycoplasma pneumoniae	Unknown	Galactosyl sulfatide	Sulfoglycosphingolipids		Gal(3SO4)(b1-1)Cer	Binding	12628483
Mycoplasma pneumoniae	Unknown	Seminolipid (Sulfogalactosylglycerolipid)	Glycolipids	Human colon adenocarcinoma cells (WiDr )	Gal(3SO4)(b1-3)-alkylacylglycerol	Binding	2470753
Mycoplasma pneumoniae	Unknown	Galactosylceramide 6-sulfate	Sulfoglycosphingolipids	Human colon adenocarcinoma cells (WiDr )	Gal(6SO4)(b1-1)Cer	Binding	2470753
Pseudomonas aeruginosa	PA-IL (51-kDa)	Galactose-alpha-1,3-galactose	Disaccharides		Gal(a1-3)Gal	Binding	15049333
Shigella dysenteriae	B subunit	Gal-Gb3	Oligoglycosylceramides	Rat small intestine	Gal(a1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	3543013
Shigella dysenteriae	Shiga toxin	Gal-Gb3	Oligoglycosylceramides		Gal(a1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2435422
Escherichia coli	Unknown	Gal-Gb3	Oligoglycosylceramides		Gal(a1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	2435422