Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID ▼
FHA (442-863)
Heparin
Glycosaminoglycans
Respiratory epithelial cells
Binding
Unknown
α-GalCer/CD1d tetramers
Glycoconjugates
V[alpha]14+ NK1.1- T cells in infected liver of mice
Binding
Lsa24
Laminin
Glycoproteins
Extracellular matrix (ECM)
Binding
Phe147 in HpaA (Helicobacter pylori adhesin A)
Lactosylceramide (Lactocerebroside)
Diosylceramides
Gal(b1-4)Glc(b1-1)Cer
Binding
Unknown
Glycoproteins with α2,3 N-linked sialic acid
Glycoproteins
NeuAc(a2-3)Gal(b1-4)GlcNAc
Binding
Unknown
NeuAcα2-3GalNAcβ1-4GlcNAc
Oligosaccharides
NeuAc(a2-3)GalNAc(b1-4)GlcNAc
Binding
Unknown
Glycoprotein with α2,6 N-linked sialic acid
Glycoproteins
NeuAc(a2-6)Gal(b1-4)GlcNAc
Binding
PA-IIL
Blood group H antigen
Disaccharides
Fuc(a1-2)Gal
Binding
RSL (30-kDa proteins)
Blood group H antigen
Disaccharides
Fuc(a1-2)Gal
Binding
RS-IIL (homologous to PA-IIL)
Mannose
Monosaccharides
Man
Binding
Displaying entries 101 - 110 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01