Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Gal-Gb3
|
Oligoglycosylceramides
|
Gal(a1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Whole dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
35S-labeled or 125I-labeled proteins
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
F1C
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Cat intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Lectin-like proteins (adhesin)
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Gonorrhoeae patients
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Lectin-like proteins (adhesin)
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Human skin
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Unknown
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Dog small intestine
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Lectin-hemagglutinin adhesins
|
isoGb3 (Isoglobotriaosylceramide; iGb3)
|
Oligoglycosylceramides
|
Gal(a1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
Displaying entries 111 - 120 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
