PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▼ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
SpaP (Antigen I/II Family)
|
Salivary glycoprotein
|
Glycoproteins
|
Saliva
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
SsaB (Lral family)
|
Salivary glycoprotein
|
Glycoproteins
|
Tooth surface
|
Binding
|
|||
SsaB (Lary family)
|
Salivary glycoprotein
|
Glycoproteins
|
Saliva
|
Binding
|
|||
Unknown
|
Fucosyl Asialo GM1
|
Oligoglycosylceramides
|
Fuc(a1-2)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Protein F (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory endothelial cells
|
Binding
|
|||
Protein F (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory epithelial cells
|
Binding
|
|||
Sfbl (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory endothelial cells
|
Binding
|
|||
Sfbl (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory epithelial cells
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01