GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule ▼	Ligand Name	Ligand Feature	Glycan Sequence	Binding	PubMed ID
Adeno-associated virus	Unknown	Glycoproteins with α2,3 N-linked sialic acid	Glycoproteins	NeuAc(a2-3)Gal(b1-4)GlcNAc	Binding	16940521
Mycoplasma pneumoniae	Unknown	Glycoproteins with terminal NeuAcα3Galβ4GlcNAc-sequences	Glycoproteins	NeuAc(a2-3)Gal(b1-4)GlcNAc	Binding	15973004
Influenza virus	Unknown	GM3(NeuAc)	Monosialoglycosphingolipids	NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer	Binding	7870741
Influenza virus	Unknown	GM1b	Monosialoglycosphingolipids	NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	7870741
Influenza virus	Unknown	Sialyl-3-Paragloboside (S-3-PG; α2,3-sialylparagloboside)	Monosialoglycosphingolipids	NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer	Binding	7870741
Rotavirus	Unknown	GM2(NeuAc)	Monosialoglycosphingolipids	GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	12628483
Influenza virus	Unknown	GM3(NeuAc)	Monosialoglycosphingolipids	NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer	Binding	1740131
Influenza virus	Unknown	GM3(NeuGc)	Monosialoglycosphingolipids	NeuGc(a2-3)Gal(b1-4)Glc(b1-1)Cer	Binding	1740131
Vibrio cholerae	Unknown	Extended GM1	Monosialoglycosphingolipids	Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer	Binding	7527546
Vibrio cholerae	Unknown	B-GM1	Monosialoglycosphingolipids	Gal(a1-3)[Fuc(a1-2)]Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	7527546