Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Blood group B antigen
|
Oligosaccharides
|
Human saliva
|
Gal(a1-3)[Fuc(a1-2)]Gal
|
Not Binding
|
||
|
Unknown
|
Blood group A antigen
|
Oligosaccharides
|
Human saliva
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc
|
Binding
|
||
|
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
Central nervous system
|
Binding
|
|||
|
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
Central nervous system
|
Binding
|
|||
|
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
Central nervous system
|
Binding
|
|||
|
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
Central nervous system
|
Binding
|
|||
|
VP2 amino acids on puff B
|
Sialic acid (α2,3)
|
Saccharides
|
Central nervous system
|
NeuAc(a2-3)
|
Binding
|
||
|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
Neural cell lines
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
||
|
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Stomach
|
NeuAc(a2-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
K99
|
unnamed ligand
|
Oligosaccharides
|
Intestinal cells
|
NeuAc(a2-3)Gal(b1-4)Glc
|
Binding
|
Displaying entries 121 - 130 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
