GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name ▼	Ligand Feature	Target Source	Glycan Sequence	Binding	PubMed ID
Shigella dysenteriae	Shiga toxin	unnamed ligand	Oligoglycosylceramides		[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=2-5	Not Binding	2435422
Escherichia coli	Unknown	unnamed ligand	Oligoglycosylceramides		[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=2-5	Binding	2435422
Shigella dysenteriae	Unknown	unnamed ligand	Oligoglycosylceramides		[Gal(a1-3)]nGal(a1-4)Gal(b1-4)Glc(b1-1)Cer *n=2-5	Not Binding	2435422
Histoplasma capsulatum	Lectin-like component	unknown carbohydrate ligand	Saccharides	Human erythrocytes		Binding	19547878
Haemophilus influenzae	HMW1	unknown carbohydrate ligand	Saccharides	Human epithelial cells (respiratory tract)		Binding	10341176
Haemophilus influenzae	HMW2	unknown carbohydrate ligand	Saccharides	Human epithelial cells (respiratory tract)		Binding	10341176
Streptococcus gordonii	SspA/SspB (AgI/II family)	unknown carbohydrate ligand	Saccharides	Platelet		Binding	16177339
Escherichia coli	AC/I-fimbriae (S-fimbrial family)	unknown carbohydrate ligand	Saccharides	Septicemic avian epithelial cells		Binding	10992500
Streptococcus pneumoniae	PsaA (Lary family)	unknown carbohydrate ligand	Saccharides	Nasopharynx, Alveolar epithelial cells		Binding	10341176
Streptococcus gordonii	Hsa	unknown carbohydrate ligand	Saccharides	Platelet		Binding	16177339