GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature ▲	Glycan Sequence	Binding	PubMed ID
Influenza virus	Unknown	GD1a	Disialoglycosphingolipids	NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	1740131
Influenza virus	Unknown	GD3(NeuAc)	Disialoglycosphingolipids	NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer	Binding	1740131
Vibrio cholerae	Unknown	GD1b	Disialoglycosphingolipids	Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	8574698
Vibrio cholerae	Unknown	GD1b	Disialoglycosphingolipids	Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	7527546
Rotavirus	Unknown	GD1a(NeuGc/NeuAc)	Disialoglycosphingolipids	NeuGc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	11160731
Rotavirus	Unknown	GD1a(NeuGc/NeuAc)	Disialoglycosphingolipids	NeuGc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	11160731
Influenza virus	Unknown	GD3(Neu5Ac9Ac)	Disialoglycosphingolipids	Ac(-9)NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer	Binding	7870741
Rotavirus	Unknown	GD1a	Disialoglycosphingolipids	NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	11160731
Rotavirus	Unknown	GD1a(NeuGc)	Disialoglycosphingolipids	NeuGc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuGc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	11160731
Vibrio cholerae	Pentameric B-subunit	GD1b	Disialoglycosphingolipids	Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer	Binding	9038159