Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source ▼ | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
NeuGc3-nLc6Cer
|
Sialoglycosphingolipids
|
Rabbit thymus
|
NeuGc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Neutrophil-activating proteins (150-kDa)
|
NeuGc3-nLc6Cer
|
Sialoglycosphingolipids
|
Rabbit thymus
|
NeuGc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
Neutrophil-activating proteins (150-kDa)
|
NeuGc3-Lc4Cer (Sialyl lactotetraosylceramide)
|
Sialoglycosphingolipids
|
Rabbit thymus
|
NeuGc(a2-3)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
F1C
|
Lactosylceramide (t18:0-h16:0-h24:0)
|
Diosylceramides
|
Rabbit small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
|
F1C
|
Alpha-Galactosyl paragloboside
|
Oligoglycosylceramides
|
Rabbit erythrocytes
|
Gal(a1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Unknown
|
Alpha-Galactosyl paragloboside
|
Oligoglycosylceramides
|
Rabbit erythrocytes
|
Gal(a1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
B subunit
|
Alpha-Galactosyl paragloboside
|
Oligoglycosylceramides
|
Rabbit erythrocytes
|
Gal(a1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
P-fimbriae
|
Gal alpha 1-4 Gal-containing glicolipids
|
Glycolipids
|
Pyelonephritis patients
|
Gal(a1-4)Gal
|
Binding
|
||
|
PapG
|
Gal alpha 1-4 Gal-containing glicolipids
|
Glycolipids
|
Pyelonephritis patients
|
Gal(a1-4)Gal
|
Binding
|
||
|
P-fimbriae
|
Gal alpha 1-4 Gal-containing isoreceptors
|
Glycosphingolipids
|
Pyelonephritis patients
|
Gal(a1-4)Gal
|
Binding
|
Displaying entries 141 - 150 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
