PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
S-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-3)GalNAc
|
Binding
|
|||
K99
|
unnamed ligand
|
Oligosaccharides
|
NeuGc(a2-3)Gal(b1-4)Glc
|
Binding
|
|||
K99
|
unnamed ligand
|
Oligosaccharides
|
NeuGc(a2-3)Gal(b1-4)Glc
|
Binding
|
|||
Unknown
|
Sialyl Lewis x (SLex) antigen (d18:1,18:0)
|
Oligosaccharides
|
NeuAc(a2-3)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b
|
Binding
|
|||
FimD
|
unnamed ligand
|
Oligosaccharides
|
Gal(a1-4)Gal
|
Binding
|
|||
FimH
|
Mannose oligosaccharides
|
Oligosaccharides
|
Man
|
Binding
|
|||
FimH
|
Mannotriose
|
Oligosaccharides
|
Man(a1-3)[Man(a1-6)]Man
|
Binding
|
|||
Lectin-like proteins (adhesin)
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-4)GlcNAc
|
Binding
|
|||
Lectin-like proteins (adhesin)
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-3)GalNAc
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01