Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Trisaccharides
|
Oligosaccharides
|
GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
|||
|
Unknown
|
Tetrasaccharides
|
Oligosaccharides
|
Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc
|
Binding
|
|||
|
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-3)GalNAc
|
Binding
|
|||
|
HMW1
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human epithelial cells
|
Binding
|
|||
|
HMW2
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human epithelial cells
|
Binding
|
|||
|
Hia
|
Oligosaccharides rich in sialic acid
|
Oligosaccharides
|
Human conjunctival cells (respiratory tract)
|
Binding
|
|||
|
SabA (sialic acid-binding adhesin)
|
Fucosylated Lewis b (Leb) histoblood group antigens
|
Oligosaccharides
|
Mucosal surface of the gastric epithelium
|
Binding
|
|||
|
Unknown
|
Blood group O antigen
|
Oligosaccharides
|
Human saliva
|
Binding
|
|||
|
BabA (blood group antigen binding adhesin)
|
Fucosylated Lewis b (Leb) histoblood group antigens
|
Oligosaccharides
|
Human gastric epithelium
|
Binding
|
|||
|
Unknown
|
N-acetyl-b-maltoheptaosylamine sulfate (SM)
|
Oligosaccharides
|
Human T cells
|
Binding
|
Displaying entries 1561 - 1570 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
