Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▼ | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
CFA/1
|
Sialic acid (α2,8)
|
Saccharides
|
Intestinal cells
|
NeuAc(a2-8)
|
Binding
|
||
|
VP2 amino acids on puff B
|
Sialic acid (α2,3)
|
Saccharides
|
Central nervous system
|
NeuAc(a2-3)
|
Binding
|
||
|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:2
|
Not Binding
|
||
|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Tongue
|
GalNAc(b
|
Not Binding
|
||
|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Buccae
|
GalNAc(b 2:2
|
Not Binding
|
||
|
PA-IL (51-kDa)
|
Phenyl-β-thiogalactoside
|
Saccharides
|
Binding
|
||||
|
S-fimbriae
|
α-Sialyl-2,3-lactose-containing receptors
|
Saccharides
|
Binding
|
||||
|
N-methylphenyl-alanine pili
|
Fucose ve mannose carbohydrate
|
Saccharides
|
Binding
|
||||
|
NeuC protein of K1 capsule (UDP GlcNAc 2-epimerase))
|
GlcNAc-6-P
|
Saccharides
|
Not Binding
|
||||
|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Binding
|
Displaying entries 151 - 160 of 1840 in total
To see the latest features, please visit our beta site.
International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
