Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Pentasaccharide
|
Oligosaccharides
|
Respiratory tract
|
NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc
|
Binding
|
||
|
CFA/1
|
Sialic acid (α2,8)
|
Saccharides
|
Intestinal cells
|
NeuAc(a2-8)
|
Binding
|
||
|
P-fimbriae
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Urine
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
||
|
Type 1-fimbriae
|
unnamed ligand
|
Oligosaccharides
|
Urine
|
Man(a1-3)Man(a1-6)Man
|
Binding
|
||
|
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Fuc(a1-2)Gal(b1-3)[Fuc(a1-4)]Gal
|
Binding
|
|||
|
VP8
|
Sialic acid
|
Monosaccharides
|
Epithelial cells of small intestine
|
Binding
|
|||
|
PlpA (pneumoniae-like protein; P65)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
|
Hlp3 (HMW3-like protein)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
|
Paracoccin
|
Laminin
|
Glycoproteins
|
Binding
|
||||
|
Unknown
|
N-linked sialylated glycoproteins
|
Glycoproteins
|
Pig neurons, glial cells
|
Binding
|
Displaying entries 151 - 160 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
