PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule ▲ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Adhesins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Adhesins
|
Fibrinogen
|
Glycoproteins
|
Human type II alveolar cells (A549)
|
Binding
|
|||
Adhesins
|
hCG (human chorionic gonadotropin)
|
Glycoproteins
|
Erythrocytes
|
Binding
|
|||
Ag I/II (Antigen I/II Family)
|
Salivary glycoprotein
|
Glycoproteins
|
Tooth surface
|
Binding
|
|||
AgfA (curli)
|
Plasminogen
|
Glycoproteins
|
Binding
|
||||
AgfA (curli)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
AgfA (curli)
|
Human contact phase proteins
|
Glycoproteins
|
Binding
|
||||
B subunit
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
Human erythrocytes
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
B subunit
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Human meconium
|
Gal(a1-4)Gal(b1-1)Cer
|
Binding
|
||
B subunit
|
unnamed ligand
|
Glycosphingolipids
|
Human meconium
|
Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01