PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
---|---|---|---|---|---|---|---|
Lectin-like proteins (adhesin)
|
H5 type 1 pentaglycosylceramide (lacto-series)
|
Oligoglycosylceramides
|
Human skin
|
Fuc(a1-2)Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Lectin-like proteins (adhesin)
|
Lc4Cer (Lactotetraosylceramide)
|
Oligoglycosylceramides
|
Human skin
|
Gal(b1-3)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Lectin-like proteins (adhesin)
|
Gb2 (Galabiosylceramide)
|
Diosylceramides
|
Gal(a1-4)Gal(b1-1)Cer
|
Not Binding
|
|||
Lectin-like proteins (adhesin)
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Gal(b1-1)Cer
|
Not Binding
|
|||
Lectin-like proteins (adhesin)
|
Glucosylceramide
|
Monoglycosylceramides
|
Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-like proteins (adhesin)
|
Lactotriaosylceramide (Lc3)
|
Oligoglycosylceramides
|
GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Lectin-like proteins (adhesin)
|
Lactotriaosylceramide (Lc3)
|
Oligoglycosylceramides
|
GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Lectin-like proteins (adhesin)
|
Lewis x (Lex) (GSL)
|
Oligoglycosylceramides
|
Gonorrhoeae patients
|
Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Lectin-like proteins (adhesin)
|
Lewis x (Lex) (GSL)
|
Oligoglycosylceramides
|
Human skin
|
Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Lectin-like proteins (adhesin)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gonorrhoeae patients
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01