PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
FimH
|
Uroplakins 1a and 1b containing a single N-linked carbohydrate of the high-mannose type
|
Glycoproteins
|
Binding
|
||||
FimH
|
Collagen
|
Glycoproteins
|
Binding
|
||||
Type 1-pili
|
CD48
|
Glycoproteins
|
Binding
|
||||
Type 1-pili
|
Uroplakins 1a and 1b containing a single N-linked carbohydrate of the high-mannose type
|
Glycoproteins
|
Binding
|
||||
Type 1-pili
|
Collagen
|
Glycoproteins
|
Binding
|
||||
Pertussis toxin
|
Fetuin
|
Glycoproteins
|
Binding
|
||||
Unknown
|
CD155
|
Glycoproteins
|
Binding
|
||||
Unknown
|
Poliovirus receptors (PVRs)
|
Glycoproteins
|
Binding
|
||||
Unknown
|
Mucin
|
Glycoproteins
|
Binding
|
||||
PT (subunit S2 of B oligomer)
|
Fetuin
|
Glycoproteins
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01