PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
K88ab/K88ac/K88ad
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Shiga toxin
|
unnamed ligand
|
Glycosphingolipids
|
Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Lectin-hemagglutinin adhesins
|
Lewis a (Lea) (GSL)
|
Glycosphingolipids
|
Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
unnamed ligand
|
Glycosphingolipids
|
Fuc(a1-2)Gal(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01