GlyCosmos Portal

Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database	Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB)	June 1, 2016

Species	Pathogen Adherence Molecule	Ligand Name	Ligand Feature ▲	Glycan Sequence	Binding	PubMed ID
Helicobacter pylori	Unknown	unnamed ligand	Oligosaccharides	Fuc(a1-2)Gal(b1-3)[Fuc(a1-4)]Gal	Binding	16564136
Helicobacter pylori	BabA (blood group antigen binding adhesin)	Blood group B-Lewis b (BLeb) antigen	Oligosaccharides	Gal(a1-3)[Fuc(a1-2)]Gal(b1-3)[Fuc(a1-4)]GlcNAc	Binding	15273394
Helicobacter pylori	BabA (blood group antigen binding adhesin)	Blood group A-Lewis b (ALeb) antigen	Oligosaccharides	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)[Fuc(a1-4)]GlcNAc	Binding	15273394
Helicobacter pylori	BabA (blood group antigen binding adhesin)	Blood group A antigen	Oligosaccharides	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	15273394
Escherichia coli	Unknown	unnamed ligand	Oligosaccharides	Gal(a1-4)Gal(b1-4)Glc(b	Binding	8574698
Norovirus	Unknown	Blood group B antigen	Oligosaccharides	Gal(a1-3)[Fuc(a1-2)]Gal	Binding	18599458
Streptococcus pneumoniae	FcsSBP (fucose solute-binding protein)	Blood group B antigen	Oligosaccharides	Gal(a1-3)[Fuc(a1-2)]Gal	Binding	19285508
Streptococcus pneumoniae	FcsSBP (fucose solute-binding protein)	Blood group A antigen	Oligosaccharides	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	19285508
Norovirus	Unknown	Blood group A antigen	Oligosaccharides	GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-3)GlcNAc	Binding	18599458
Helicobacter mustelae	Lectin-hemagglutinin adhesins	Blood group Lewis b (Leb) antigen	Oligosaccharides		Not Binding	12704182