PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▲ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
17-kDa HBP (Heparin-binding protein)
|
Basic fibroblast growth factor (bFGF)
|
Glycoproteins
|
Binding
|
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17-kDa HBP (Heparin-binding protein)
|
von Willebrand factor (VWF)
|
Glycoproteins
|
Binding
|
||||
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
17-kDa HBP (Heparin-binding protein)
|
Basic fibroblast growth factor (bFGF)
|
Glycoproteins
|
Binding
|
||||
17-kDa HBP (Heparin-binding protein)
|
von Willebrand factor (VWF)
|
Glycoproteins
|
Binding
|
||||
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Gal(b1-4)GlcNAc
|
Binding
|
|||
Unknown
|
Salivary glycoprotein (gp340)
|
Glycoproteins
|
Neonatal meningitis
|
Binding
|
|||
Ca2+-independent lectins
|
Hs antigen
|
Glycoproteins
|
NeuAc(a2-3)Gal(b1-4)Glc-HSA
|
Binding
|
|||
Adhesins
|
PMN (polymorphonuclear leukocytes) surface glycoproteins in the presence of sialic acid
|
Glycoproteins
|
Human peripheral blood buffy coat cells
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01