PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule ▲ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Fetuin
|
Glycoproteins
|
Not Binding
|
||||
Unknown
|
PGCs (polyglycosyl ceramides)
|
Glycosphingolipids
|
Binding
|
||||
Unknown
|
Ganglio glycolipids
|
Glycosphingolipids
|
Binding
|
||||
Unknown
|
PGCs (polyglycosyl ceramides)
|
Glycosphingolipids
|
Binding
|
||||
Unknown
|
N-linked glycans
|
N-glycans
|
Binding
|
||||
Unknown
|
Phosphatidylserine (PS)
|
Non-glycosylated Lipids
|
Binding
|
||||
Unknown
|
Sphingomyelin
|
Non-glycosylated Lipids
|
Binding
|
||||
Unknown
|
N-linked oligosaccharides of glycophorins
|
Oligosaccharides
|
Binding
|
||||
Unknown
|
NeuGc3-nLc6Cer
|
Sialoglycosphingolipids
|
Human colon adenocarcinoma cells (WiDr )
|
NeuGc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
unnamed ligand
|
Oligoglycosylceramides
|
Human erythrocytes
|
GalNAc(b1-3)GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01