PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
---|---|---|---|---|---|---|---|
"DbpA, DbpB, Bgp"
|
Collagen (type I)
|
Glycoproteins
|
Binding
|
||||
"DbpA, DbpB, Bgp"
|
Heparin
|
Glycosaminoglycans
|
Binding
|
||||
"OspA, OspB, OspC"
|
Gangliosides
|
Sialoglycosphingolipids
|
Binding
|
||||
"P-selectin mimic, MSP2"
|
Fucosylated PSGL-1 (P-selectin glycoprotein ligand-1)
|
Glycoproteins
|
Binding
|
||||
"OspA, OspB, OspC"
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
"DbpA, DbpB, Bgp"
|
Decorin
|
Proteoglycans
|
Binding
|
||||
"MSP1a, MSP1b, MSP2"
|
unknown carbohydrate ligand
|
Saccharides
|
Binding
|
||||
BBK32
|
Dermatan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
BBK32
|
Heparin
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
Unknown
|
Mannose 6-phosphate insulin-like growth factor-II receptor (M6P/IGF-IIR)
|
Glycoproteins
|
Fetal calf serum
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01