Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Sialic acid
|
Monosaccharides
|
Chicken embryo related cells
|
Binding
|
|||
|
Unknown
|
Sialic acid (both O- and N-linked)
|
Monosaccharides
|
Nucleated bovine cells
|
Binding
|
|||
|
SfaI-S
|
Sialic acid
|
Monosaccharides
|
Epithelial cells, Extracellular matrix (ECM)
|
Binding
|
|||
|
Adhesins
|
Sialic acid
|
Monosaccharides
|
HL-60 promyelocytic leukemia cell line, Leukosialin (CD43)
|
Binding
|
|||
|
Hsa
|
Sialic acid
|
Monosaccharides
|
Human oral cavity (erythrocytes and polymorphonuclear leukocytes)
|
Binding
|
|||
|
CbpA; SpsA; PbcA; PspC (CBPs)
|
Sialic acid
|
Monosaccharides
|
Cytokine activated epithelial and endothelial cells
|
Binding
|
|||
|
sigma 1 proteins
|
Sialic acid
|
Monosaccharides
|
Murine intestine, Murine spleen, Murine liver, Murine brain, Human cholangiocarcinoma cells
|
Binding
|
|||
|
Iron-induced surface-exposed proteins
|
Sialic acid
|
Monosaccharides
|
Respiratory epithelial cells (A549)
|
Binding
|
|||
|
Unknown
|
Sialic acid
|
Monosaccharides
|
Glycophorins A/B on the erythrocyte membrane
|
Binding
|
|||
|
Unknown
|
Sialic acid
|
Monosaccharides
|
MA-104 cells
|
Binding
|
Displaying entries 1661 - 1670 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
