PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▼ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Sialic acid
|
Monosaccharides
|
Chicken embryo related cells
|
Binding
|
|||
Unknown
|
Sialic acid (both O- and N-linked)
|
Monosaccharides
|
Nucleated bovine cells
|
Binding
|
|||
SfaI-S
|
Sialic acid
|
Monosaccharides
|
Epithelial cells, Extracellular matrix (ECM)
|
Binding
|
|||
Adhesins
|
Sialic acid
|
Monosaccharides
|
HL-60 promyelocytic leukemia cell line, Leukosialin (CD43)
|
Binding
|
|||
Hsa
|
Sialic acid
|
Monosaccharides
|
Human oral cavity (erythrocytes and polymorphonuclear leukocytes)
|
Binding
|
|||
CbpA; SpsA; PbcA; PspC (CBPs)
|
Sialic acid
|
Monosaccharides
|
Cytokine activated epithelial and endothelial cells
|
Binding
|
|||
sigma 1 proteins
|
Sialic acid
|
Monosaccharides
|
Murine intestine, Murine spleen, Murine liver, Murine brain, Human cholangiocarcinoma cells
|
Binding
|
|||
Iron-induced surface-exposed proteins
|
Sialic acid
|
Monosaccharides
|
Respiratory epithelial cells (A549)
|
Binding
|
|||
Unknown
|
Sialic acid
|
Monosaccharides
|
Glycophorins A/B on the erythrocyte membrane
|
Binding
|
|||
Unknown
|
Sialic acid
|
Monosaccharides
|
MA-104 cells
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01