PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▼ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
Chondroitin 4-sulfate (C-4S)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparin (N-desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Binding
|
|||
Unknown
|
Heparin (completely desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
DbpA
|
Decorin
|
Proteoglycans
|
Extracellular matrix (ECM)
|
Binding
|
|||
"DbpA, DbpB, Bgp"
|
Decorin
|
Proteoglycans
|
Binding
|
||||
Unknown
|
Dermatan sulfate
|
Glycosaminoglycans
|
Glial cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01