PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule ▲ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human lung, Human polymorphonuclear leukocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human erythrocytes, Whole dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human lung, Human polymorphonuclear leukocytes, Human glioma brain cells
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Intestinal tract
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Dog small intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human erythrocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
Lewis b (Leb-HSA)
|
Glycoproteins
|
Human serum albumin
|
Fuc(a1-2)Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(c)-APD
|
Binding
|
||
Unknown
|
Galactosylceramide (or derivative)
|
Monoglycosylceramides
|
Human colon epithelial HT29 cells
|
Gal(b1-1)Cer
|
Binding
|
||
Unknown
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Chinchilla tracheal epithelium
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Unknown
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Vero cells
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01