PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
human granulocytes
|
Not Binding
|
|||
SNA lectins
|
Minor NeuAcα6-containing molecules
|
Glycoconjugates
|
Human leukocytes
|
Binding
|
|||
Type 1-fimbriae
|
Glycoside p-nitrophenyl alpha-D-mannopyranoside
|
Glycoconjugates
|
Patient with urinary tract infection
|
Binding
|
|||
Transmembrane heavy subunit (Hgl; 170-kDa) disulfide linked to a GPI-anchored light subunit (Lgl; 31-to 35-kDa).
|
β-2 and β-7 integrins
|
Glycoproteins
|
Intestinal cells
|
Binding
|
|||
Yeast cells and conidia
|
Fibronectin
|
Glycoproteins
|
Extracellular matrix (ECM)
|
Binding
|
|||
Adhesins
|
Fibronectin
|
Glycoproteins
|
Human type II alveolar cells (A549)
|
Binding
|
|||
Protein F (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory endothelial cells
|
Binding
|
|||
Protein F (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Respiratory epithelial cells
|
Binding
|
|||
Fibre proteins
|
HSA glycoconjugates
|
Glycoproteins
|
Human corneal epithelial(HEC) cells
|
Binding
|
|||
Lsa24
|
Laminin
|
Glycoproteins
|
Extracellular matrix (ECM)
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01