Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence ▲ Binding PubMed ID
Lectin-hemagglutinin adhesins
Acid glycosphingolipids
Acidic Glycosphingolipids
human granulocytes
Not Binding
SNA lectins
Minor NeuAcα6-containing molecules
Glycoconjugates
Human leukocytes
Binding
Type 1-fimbriae
Glycoside p-nitrophenyl alpha-D-mannopyranoside
Glycoconjugates
Patient with urinary tract infection
Binding
Transmembrane heavy subunit (Hgl; 170-kDa) disulfide linked to a GPI-anchored light subunit (Lgl; 31-to 35-kDa).
β-2 and β-7 integrins
Glycoproteins
Intestinal cells
Binding
Yeast cells and conidia
Fibronectin
Glycoproteins
Extracellular matrix (ECM)
Binding
Adhesins
Fibronectin
Glycoproteins
Human type II alveolar cells (A549)
Binding
Protein F (Antigen I/II)
Fibronectin
Glycoproteins
Respiratory endothelial cells
Binding
Protein F (Antigen I/II)
Fibronectin
Glycoproteins
Respiratory epithelial cells
Binding
Fibre proteins
HSA glycoconjugates
Glycoproteins
Human corneal epithelial(HEC) cells
Binding
Lsa24
Laminin
Glycoproteins
Extracellular matrix (ECM)
Binding
Displaying entries 1681 - 1690 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01