PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Tongue
|
GalNAc(b
|
Not Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Buccae
|
GalNAc(b 2:2
|
Not Binding
|
||
PA-IL (51-kDa)
|
Phenyl-β-thiogalactoside
|
Saccharides
|
Binding
|
||||
S-fimbriae
|
α-Sialyl-2,3-lactose-containing receptors
|
Saccharides
|
Binding
|
||||
N-methylphenyl-alanine pili
|
Fucose ve mannose carbohydrate
|
Saccharides
|
Binding
|
||||
NeuC protein of K1 capsule (UDP GlcNAc 2-epimerase))
|
GlcNAc-6-P
|
Saccharides
|
Not Binding
|
||||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Buccae
|
GalNAc(b 2:1
|
Not Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Not Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Buccae
|
GalNAc(b 2:1
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01