Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species ▼ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
Heparan sulfate
|
Glycosaminoglycans
|
C6 glioma cells, EA-Hy926 cells
|
Binding
|
|||
|
Adhesins
|
terminal Gal(3SO4) β1- residues
|
Sulfoglycosphingolipids
|
Human lung, Human trachea
|
Gal(3SO4)(b
|
Binding
|
||
|
FHA (filamentous hemagglutinin)
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
Cell surface
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
||
|
FHA (filamentous hemagglutinin)
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
|||
|
Unknown
|
Sulfatide (CSE)
|
Sulfoglycosphingolipids
|
HSO3(-3)Gal(b1-1)Cer
|
Binding
|
|||
|
FHA (filamentous hemagglutinin)
|
Galactose on sulfated glycolipids
|
Glycolipids
|
Gal
|
Binding
|
|||
|
Unknown
|
Asialo-GM2 (Gangliotriosylceramide; GgO3)
|
Oligoglycosylceramides
|
GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
FHA (tail region)
|
Complement receptor 3 (CR3) integrins
|
Glycoproteins
|
Macrophages
|
Binding
|
|||
|
Pertussis toxin
|
Fetuin
|
Glycoproteins
|
Bovine
|
Binding
|
|||
|
Iron-induced surface-exposed proteins
|
Mucin
|
Glycoproteins
|
Respiratory epithelial cells (A549)
|
Binding
|
Displaying entries 1681 - 1690 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
