PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▼ |
---|---|---|---|---|---|---|---|
SabA (sialic acid-binding adhesin)
|
Sialyl Lewis x (SLex) antigen
|
Oligosaccharides
|
Gastric epithelial progenitors (GEPs)
|
NeuAc(a2-3)Gal(b1-4)
|
Binding
|
||
HpaA
|
Sialyl Lewis x (SLex) antigen
|
Oligosaccharides
|
Gastric epithelial progenitors (GEPs)
|
NeuAc(a2-3)Gal(b1-4)
|
Binding
|
||
HP0721
|
Sialyl Lewis x (SLex) antigen
|
Oligosaccharides
|
Gastric epithelial progenitors (GEPs)
|
NeuAc(a2-3)Gal(b1-4)
|
Binding
|
||
Unknown
|
Mannose 6-phosphate insulin-like growth factor-II receptor (M6P/IGF-IIR)
|
Glycoproteins
|
Fetal calf serum
|
Binding
|
|||
Unknown
|
Mannose 6-phosphate insulin-like growth factor-II receptor (M6P/IGF-IIR)
|
Glycoproteins
|
Fetal calf serum
|
Binding
|
|||
BBK32
|
Dermatan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
BBK32
|
Heparin
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
"OspA, OspB, OspC"
|
Galactosylceramide (Galactocerebroside)
|
Monoglycosylceramides
|
Gal(b1-1)Cer
|
Binding
|
|||
"DbpA, DbpB, Bgp"
|
Dermatan sulfate
|
Glycosaminoglycans
|
Binding
|
||||
"DbpA, DbpB, Bgp"
|
Collagen (type I)
|
Glycoproteins
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01