PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▲ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Buccae
|
GalNAc(b 2:1
|
Binding
|
||
Type 2-fimbriae
|
β-linked galactosamine
|
Saccharides
|
Plaque
|
GalNAc(b 2:1
|
Not Binding
|
||
EfaA (Lary family)
|
D-Galactose-containing residues
|
Saccharides
|
Gal
|
Binding
|
|||
Lectin-like component
|
unknown carbohydrate ligand
|
Saccharides
|
Human erythrocytes
|
Binding
|
|||
HMW1
|
unknown carbohydrate ligand
|
Saccharides
|
Human epithelial cells (respiratory tract)
|
Binding
|
|||
HMW2
|
unknown carbohydrate ligand
|
Saccharides
|
Human epithelial cells (respiratory tract)
|
Binding
|
|||
SspA/SspB (AgI/II family)
|
unknown carbohydrate ligand
|
Saccharides
|
Platelet
|
Binding
|
|||
AC/I-fimbriae (S-fimbrial family)
|
unknown carbohydrate ligand
|
Saccharides
|
Septicemic avian epithelial cells
|
Binding
|
|||
PsaA (Lary family)
|
unknown carbohydrate ligand
|
Saccharides
|
Nasopharynx, Alveolar epithelial cells
|
Binding
|
|||
Hsa
|
unknown carbohydrate ligand
|
Saccharides
|
Platelet
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01