PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Neuraminic acid
|
Monosaccharides
|
Binding
|
||||
Unknown
|
Sialic acid
|
Monosaccharides
|
Binding
|
||||
TLP (Triple-layered virus particles)
|
Gangliosides
|
Sialoglycosphingolipids
|
Binding
|
||||
"OspA, OspB, OspC"
|
Gangliosides
|
Sialoglycosphingolipids
|
Binding
|
||||
Unknown
|
Neuraminic acid-containing sialoglycosphingolipids
|
Sialoglycosphingolipids
|
Binding
|
||||
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
Not Binding
|
||||
SafS
|
α-sialyl-2-3-β-galactose
|
Disaccharides
|
Binding
|
||||
Neurotoxin (type B)
|
Complex of synaptotagmin II and ganglioside GT1b or GD1a
|
Glycoconjugates
|
Binding
|
||||
Unknown
|
Complex of synaptotagmin II and ganglioside GT1b or GD1a
|
Glycoconjugates
|
Binding
|
||||
Paracoccin
|
Laminin
|
Glycoproteins
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01