PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature ▼ | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Heat-labile enterotoxin
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Cholera toxin
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
F1C
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Tetanus toxin
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
PapG
|
alpha-D-galactopyranosyl-(1-4)-beta-D-galactopyranose
|
Disaccharides
|
Uroepithelial cells
|
Gal(a1-4)Gal
|
Binding
|
||
K1
|
unnamed ligand
|
Disaccharides
|
Endothelial cells
|
GlcNAc(b1-4)GlcNAc
|
Binding
|
||
Progenitor toxin (type A)
|
Lactose
|
Disaccharides
|
Intestine-407 cells
|
Gal(b1-4)Glc
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01