PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▲ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Pag (Antigen I/II)
|
Salivary glycoprotein
|
Glycoproteins
|
Saliva
|
Binding
|
|||
Pag (Antigen I/II)
|
Salivary glycoprotein
|
Glycoproteins
|
Tooth surface
|
Binding
|
|||
SpaP (Antigen I/II Family)
|
Salivary glycoprotein
|
Glycoproteins
|
Saliva
|
Binding
|
|||
Adhesins
|
Gb4 (Globoside; Globotetraose; P antigen)
|
Oligoglycosylceramides
|
Erythrocytes
|
GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PO
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
||
PN
|
unnamed ligand
|
Oligosaccharides
|
human erythrocytes
|
Gal(a1-4)Gal
|
Binding
|
||
Unknown
|
unnamed ligand
|
Oligosaccharides
|
Respiratory tract
|
Gal(a1-4)Gal(b1-4)Glc
|
Binding
|
||
Unknown
|
Neoglycoproteins (containing Pk Antigen)
|
Glycoproteins
|
Gal(a1-4)Gal(b1-4)Glc
|
Binding
|
|||
Adhesins
|
P1 antigen (GSL)
|
Glycosphingolipids
|
Gal(a1-4)Gal
|
Binding
|
|||
18-kDa proteins
|
unnamed ligand
|
Oligosaccharides
|
Gal(a1-4)Gal
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01