PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▼ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Type 1-pili
|
Laminin
|
Glycoproteins
|
Binding
|
||||
"P-selectin mimic, MSP2"
|
Fucosylated PSGL-1 (P-selectin glycoprotein ligand-1)
|
Glycoproteins
|
Binding
|
||||
BBK32
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
FnbB
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
PspC (Lary family) (alias: SpsA/CbpA/PbcA/Hic)
|
C3 and complement factor H
|
Glycoproteins
|
Binding
|
||||
FnbB
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
FnbA
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
CshA
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
CshA (Antigen I/II)
|
Fibronectin
|
Glycoproteins
|
Binding
|
||||
Unknown
|
Cluster of differentiation 4 (CD4)
|
Glycoproteins
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01