Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
|---|---|---|---|---|---|---|---|
|
VP8 (spike protein)
|
Sialic acid(2-O-methyl-α-Neu5Gc (Neu5Gc2Me))
|
Monosaccharides
|
Binding
|
||||
|
VP8 (galectin)
|
Sialic acid(2-O-methyl-α-Neu5Ac (Neu5Ac2Me))
|
Monosaccharides
|
Binding
|
||||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Fibroblasts, Epithelial cells, Endothelial cells, Hepatocytes
|
Binding
|
|||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Fibroblasts, Epithelial cells, Endothelial cells, Hepatocytes
|
Binding
|
|||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Binding
|
||||
|
Iron-induced surface-exposed proteins
|
Mucin
|
Glycoproteins
|
Respiratory epithelial cells (A549)
|
Binding
|
|||
|
Iron-induced surface-exposed proteins
|
Sialic acid
|
Monosaccharides
|
Respiratory epithelial cells (A549)
|
Binding
|
|||
|
Unknown
|
MUC16 mucin
|
Glycoproteins
|
Human corneal-limbal epithelial(HCLE) cells
|
Binding
|
|||
|
OpcA
|
Sialic acid-containing polysaccharides
|
Polysaccharides
|
Epithelial cells
|
Binding
|
|||
|
Adhesins
|
Fibronectin
|
Glycoproteins
|
Human type II alveolar cells (A549)
|
Binding
|
Displaying entries 1751 - 1760 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
