PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
K88ab/K88ac/K88ad
|
Lewis x (Lex) (GSL)
|
Oligoglycosylceramides
|
Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
Lewis x (Lex) (GSL)
|
Oligoglycosylceramides
|
Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Neutrophil-activating proteins (150-kDa)
|
DSPG (Disialosyl paragloboside)
|
Disialoglycosphingolipids
|
Human erythrocytes
|
NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
B subunit
|
DSGG (Disialosyl galactosyl globoside, disialyl Gb5)
|
Disialoglycosphingolipids
|
Human erythrocytes
|
NeuAc(a2-3)Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-3)Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Neutrophil-activating proteins (150-kDa)
|
Sialyl Lewis a (SLea) (GSL)
|
Monosialoglycosphingolipids
|
Human bile bladder tumor
|
NeuAc(a2-3)Gal(b1-3)[Fuc(a1-4)]GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
unnamed ligand
|
Sialoglycosphingolipids
|
Frog brain
|
Gal(b1-3)[NeuAc(a2-6)]GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human erythrocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Neutrophil-activating proteins (150-kDa)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Dog intestine
|
Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
Unknown
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human erythrocytes
|
Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
PrsG (class III)
|
Gb3 (Globotriaosylceramide; Trihexosylceramide; Pk antigen (GSL); CTH)
|
Oligoglycosylceramides
|
Human erythrocytes
|
Gal(a1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01