PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species ▲ | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
CBPs (carbohydrate-binding proteins)
|
High mannose glycans containig the Manα1-2Manα1-6Manα1-6 structure
|
Saccharides
|
Man(a1-2)Man(a1-6)Man(a1-6)
|
Binding
|
|||
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
CBP (chitin-binding proteins) 53-kDa
|
N-Acetylglucosamine
|
Monosaccharides
|
GlcNAc
|
Binding
|
|||
MSHA (mannose/glucose-specific hemagglutinin)
|
Mannose
|
Monosaccharides
|
Patient with acute watery diarrhea
|
Man
|
Binding
|
||
MSHA (mannose/glucose-specific hemagglutinin)
|
Glucose
|
Monosaccharides
|
Patient with acute watery diarrhea
|
Glc
|
Binding
|
||
Cholera toxin
|
GD1b
|
Disialoglycosphingolipids
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Cholera toxin
|
GD1b
|
Disialoglycosphingolipids
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01