Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule ▼ | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Adhesins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
Adhesins
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
|
Adhesins
|
Fibrinogen
|
Glycoproteins
|
Human type II alveolar cells (A549)
|
Binding
|
|||
|
Adhesins
|
hCG (human chorionic gonadotropin)
|
Glycoproteins
|
Erythrocytes
|
Binding
|
|||
|
AC/I-fimbriae (S-fimbrial family)
|
unknown carbohydrate ligand
|
Saccharides
|
Septicemic avian epithelial cells
|
Binding
|
|||
|
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
|
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
|
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
|
A27L proteins
|
Heparan sulfate
|
Glycosaminoglycans
|
Mammalian cell surface
|
Binding
|
|||
|
A and B polypeptide subunits
|
GD1b
|
Disialoglycosphingolipids
|
Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-8)NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
Displaying entries 1751 - 1760 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
